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Nonlinear Control in the Nematode C. elegans
Recent whole-brain calcium imaging recordings of the nematode C. elegans have demonstrated that the neural activity associated with behavior is dominated by dynamics on a low-dimensional manifold that can be clustered according to behavioral states. Previous models of C. elegans dynamics have either...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7862714/ https://www.ncbi.nlm.nih.gov/pubmed/33551783 http://dx.doi.org/10.3389/fncom.2020.616639 |
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author | Morrison, Megan Fieseler, Charles Kutz, J. Nathan |
author_facet | Morrison, Megan Fieseler, Charles Kutz, J. Nathan |
author_sort | Morrison, Megan |
collection | PubMed |
description | Recent whole-brain calcium imaging recordings of the nematode C. elegans have demonstrated that the neural activity associated with behavior is dominated by dynamics on a low-dimensional manifold that can be clustered according to behavioral states. Previous models of C. elegans dynamics have either been linear models, which cannot support the existence of multiple fixed points in the system, or Markov-switching models, which do not describe how control signals in C. elegans neural dynamics can produce switches between stable states. It remains unclear how a network of neurons can produce fast and slow timescale dynamics that control transitions between stable states in a single model. We propose a global, nonlinear control model which is minimally parameterized and captures the state transitions described by Markov-switching models with a single dynamical system. The model is fit by reproducing the timeseries of the dominant PCA mode in the calcium imaging data. Long and short time-scale changes in transition statistics can be characterized via changes in a single parameter in the control model. Some of these macro-scale transitions have experimental correlates to single neuro-modulators that seem to act as biological controls, allowing this model to generate testable hypotheses about the effect of these neuro-modulators on the global dynamics. The theory provides an elegant characterization of control in the neuron population dynamics in C. elegans. Moreover, the mathematical structure of the nonlinear control framework provides a paradigm that can be generalized to more complex systems with an arbitrary number of behavioral states. |
format | Online Article Text |
id | pubmed-7862714 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-78627142021-02-06 Nonlinear Control in the Nematode C. elegans Morrison, Megan Fieseler, Charles Kutz, J. Nathan Front Comput Neurosci Neuroscience Recent whole-brain calcium imaging recordings of the nematode C. elegans have demonstrated that the neural activity associated with behavior is dominated by dynamics on a low-dimensional manifold that can be clustered according to behavioral states. Previous models of C. elegans dynamics have either been linear models, which cannot support the existence of multiple fixed points in the system, or Markov-switching models, which do not describe how control signals in C. elegans neural dynamics can produce switches between stable states. It remains unclear how a network of neurons can produce fast and slow timescale dynamics that control transitions between stable states in a single model. We propose a global, nonlinear control model which is minimally parameterized and captures the state transitions described by Markov-switching models with a single dynamical system. The model is fit by reproducing the timeseries of the dominant PCA mode in the calcium imaging data. Long and short time-scale changes in transition statistics can be characterized via changes in a single parameter in the control model. Some of these macro-scale transitions have experimental correlates to single neuro-modulators that seem to act as biological controls, allowing this model to generate testable hypotheses about the effect of these neuro-modulators on the global dynamics. The theory provides an elegant characterization of control in the neuron population dynamics in C. elegans. Moreover, the mathematical structure of the nonlinear control framework provides a paradigm that can be generalized to more complex systems with an arbitrary number of behavioral states. Frontiers Media S.A. 2021-01-22 /pmc/articles/PMC7862714/ /pubmed/33551783 http://dx.doi.org/10.3389/fncom.2020.616639 Text en Copyright © 2021 Morrison, Fieseler and Kutz. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Morrison, Megan Fieseler, Charles Kutz, J. Nathan Nonlinear Control in the Nematode C. elegans |
title | Nonlinear Control in the Nematode C. elegans |
title_full | Nonlinear Control in the Nematode C. elegans |
title_fullStr | Nonlinear Control in the Nematode C. elegans |
title_full_unstemmed | Nonlinear Control in the Nematode C. elegans |
title_short | Nonlinear Control in the Nematode C. elegans |
title_sort | nonlinear control in the nematode c. elegans |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7862714/ https://www.ncbi.nlm.nih.gov/pubmed/33551783 http://dx.doi.org/10.3389/fncom.2020.616639 |
work_keys_str_mv | AT morrisonmegan nonlinearcontrolinthenematodecelegans AT fieselercharles nonlinearcontrolinthenematodecelegans AT kutzjnathan nonlinearcontrolinthenematodecelegans |