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Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov

A novel Gram-negative, motile, aerobic rod-shaped bacterium designated BGMRC 2031(T) was isolated from mangrove sediment collected from Guangxi Province, China. Optimal growth occurred at 28 °C and pH 7.0–8.0 in the presence of 1% (w/v) NaCl. Alignment based on 16S rRNA gene sequences indicated that...

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Detalles Bibliográficos
Autores principales: Li, Mi, Liu, Kai, Liu, Yonghong, Gao, Chenghai, Yi, Xiangxi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7864827/
https://www.ncbi.nlm.nih.gov/pubmed/33464391
http://dx.doi.org/10.1007/s00284-020-02311-w
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author Li, Mi
Liu, Kai
Liu, Yonghong
Gao, Chenghai
Yi, Xiangxi
author_facet Li, Mi
Liu, Kai
Liu, Yonghong
Gao, Chenghai
Yi, Xiangxi
author_sort Li, Mi
collection PubMed
description A novel Gram-negative, motile, aerobic rod-shaped bacterium designated BGMRC 2031(T) was isolated from mangrove sediment collected from Guangxi Province, China. Optimal growth occurred at 28 °C and pH 7.0–8.0 in the presence of 1% (w/v) NaCl. Alignment based on 16S rRNA gene sequences indicated that strain BGMRC 2031(T) is most closely related to Sodalis praecaptivus HS1(T) (95.6%, sequence similarity), followed by Biostraticola tofi DSM 19580(T) (95.5%), Sodalis glossinidius DSM 16929(T) (95.4%), and Brenneria goodwinii FRB141(T) (94.9%) sequence similarity. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain BGMRC 2031(T) formed a distinct branch in a robust cluster and revealed that strain BGMRC 2031(T), genera Biostraticola and Sodalis, formed a novel family-level clade in the order Enterobacterales. The novel strain showed an average nucleotide similarity of 74.7%, 74.2%, and 73.1% for S. praecaptivus HS1(T), S. glossinidius DSM 16929(T), and B. tofi DSM 19580(T), respectively. The genomes of the BGMRC 2031(T) shared the presence of a riboflavin synthesis gene cluster. The menaquinones of strain BGMRC 2031(T) were MK-8 and Q-8, which were similar to those of genus Biostraticola. The major fatty acids (> 10%) were C(16:0) (19.9%), summed feature 2 (iso-C(16:1) and/or C(14:0) 3-OH, 18.10%), summed feature 3 (C(16:1) ω7c and/or C(16:1) ω6c, 15.3%), C(12:0) (13.9%), C(17:0) cyclo (11.4%), and C(14:0) (10.4%). The main polar lipids were phosphatidyl methylethanolamine, phosphatidyl glycerol, diphosphatidyl glycerol, phosphatidyl inositol, one unidentified phospholipid, and one unknown polar lipid. The G+C content of strain BGMRC 2031(T) was 55.4%. Strain BGMRC 2031(T) could extend the mean lifespan and maximum lifespan of Caenorhabditis elegans by 4.5% and 12.5%, respectively. Overall, the results of this study indicate that BGMRC 2031(T) is a novel species in a new genus, for which the name Bruguierivorax albus gen. nov. sp. nov. is proposed, and the type of strain is designated as BGMRC 2031(T) (= NBRC 111907(T) = KCTC 52119(T)). In addition, a novel family, Bruguierivoracaceae fam. nov., is proposed to accommodate the genera Bruguierivorax, Biostraticola, and Sodalis. SUPPLEMENTARY INFORMATION: The online version of this article (10.1007/s00284-020-02311-w) contains supplementary material, which is available to authorized users.
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spelling pubmed-78648272021-02-16 Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov Li, Mi Liu, Kai Liu, Yonghong Gao, Chenghai Yi, Xiangxi Curr Microbiol Article A novel Gram-negative, motile, aerobic rod-shaped bacterium designated BGMRC 2031(T) was isolated from mangrove sediment collected from Guangxi Province, China. Optimal growth occurred at 28 °C and pH 7.0–8.0 in the presence of 1% (w/v) NaCl. Alignment based on 16S rRNA gene sequences indicated that strain BGMRC 2031(T) is most closely related to Sodalis praecaptivus HS1(T) (95.6%, sequence similarity), followed by Biostraticola tofi DSM 19580(T) (95.5%), Sodalis glossinidius DSM 16929(T) (95.4%), and Brenneria goodwinii FRB141(T) (94.9%) sequence similarity. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain BGMRC 2031(T) formed a distinct branch in a robust cluster and revealed that strain BGMRC 2031(T), genera Biostraticola and Sodalis, formed a novel family-level clade in the order Enterobacterales. The novel strain showed an average nucleotide similarity of 74.7%, 74.2%, and 73.1% for S. praecaptivus HS1(T), S. glossinidius DSM 16929(T), and B. tofi DSM 19580(T), respectively. The genomes of the BGMRC 2031(T) shared the presence of a riboflavin synthesis gene cluster. The menaquinones of strain BGMRC 2031(T) were MK-8 and Q-8, which were similar to those of genus Biostraticola. The major fatty acids (> 10%) were C(16:0) (19.9%), summed feature 2 (iso-C(16:1) and/or C(14:0) 3-OH, 18.10%), summed feature 3 (C(16:1) ω7c and/or C(16:1) ω6c, 15.3%), C(12:0) (13.9%), C(17:0) cyclo (11.4%), and C(14:0) (10.4%). The main polar lipids were phosphatidyl methylethanolamine, phosphatidyl glycerol, diphosphatidyl glycerol, phosphatidyl inositol, one unidentified phospholipid, and one unknown polar lipid. The G+C content of strain BGMRC 2031(T) was 55.4%. Strain BGMRC 2031(T) could extend the mean lifespan and maximum lifespan of Caenorhabditis elegans by 4.5% and 12.5%, respectively. Overall, the results of this study indicate that BGMRC 2031(T) is a novel species in a new genus, for which the name Bruguierivorax albus gen. nov. sp. nov. is proposed, and the type of strain is designated as BGMRC 2031(T) (= NBRC 111907(T) = KCTC 52119(T)). In addition, a novel family, Bruguierivoracaceae fam. nov., is proposed to accommodate the genera Bruguierivorax, Biostraticola, and Sodalis. SUPPLEMENTARY INFORMATION: The online version of this article (10.1007/s00284-020-02311-w) contains supplementary material, which is available to authorized users. Springer US 2021-01-19 2021 /pmc/articles/PMC7864827/ /pubmed/33464391 http://dx.doi.org/10.1007/s00284-020-02311-w Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Li, Mi
Liu, Kai
Liu, Yonghong
Gao, Chenghai
Yi, Xiangxi
Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
title Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
title_full Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
title_fullStr Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
title_full_unstemmed Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
title_short Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
title_sort bruguierivorax albus gen. nov. sp. nov. isolated from mangrove sediment and proposal of bruguierivoracaceae fam. nov
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7864827/
https://www.ncbi.nlm.nih.gov/pubmed/33464391
http://dx.doi.org/10.1007/s00284-020-02311-w
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