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Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs
The crystal structures of two azobenzene derivative Schiff base metal complexes (new C(44)H(40)CuN(6)O(2) of P-1 and known C(44)H(38)MnN(6)O(7) of P2(1)/c abbreviated as Cu and Mn, respectively) were (re-)determined experimentally using conventional X-ray analysis to obtain electron density using a...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7865803/ https://www.ncbi.nlm.nih.gov/pubmed/33494463 http://dx.doi.org/10.3390/molecules26030551 |
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author | Takiguchi, Yuji Onami, Yuika Haraguchi, Tomoyuki Akitsu, Takashiro |
author_facet | Takiguchi, Yuji Onami, Yuika Haraguchi, Tomoyuki Akitsu, Takashiro |
author_sort | Takiguchi, Yuji |
collection | PubMed |
description | The crystal structures of two azobenzene derivative Schiff base metal complexes (new C(44)H(40)CuN(6)O(2) of P-1 and known C(44)H(38)MnN(6)O(7) of P2(1)/c abbreviated as Cu and Mn, respectively) were (re-)determined experimentally using conventional X-ray analysis to obtain electron density using a PLATON program. Cu affords a four-coordinated square planar geometry, while Mn affords a hexa-coordinated distorted octahedral geometry whose apical sites are occupied by an acetate ion and water ligands, which are associated with hydrogen bonds. The π-π or CH-π and hydrogen bonding intermolecular interactions were found in both crystals, which were also analyzed using a Hirshfeld surface analysis program. To compare these results with experimental results, a density functional theory (DFT) calculation was also carried out based on the crystal structures to obtain calculated electron density using a conventional Gaussian program. These results revealed that the axial Mn-O coordination bonds of Mn were relatively weaker than the in-plane M-N or M-O coordination bonds. |
format | Online Article Text |
id | pubmed-7865803 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-78658032021-02-07 Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs Takiguchi, Yuji Onami, Yuika Haraguchi, Tomoyuki Akitsu, Takashiro Molecules Communication The crystal structures of two azobenzene derivative Schiff base metal complexes (new C(44)H(40)CuN(6)O(2) of P-1 and known C(44)H(38)MnN(6)O(7) of P2(1)/c abbreviated as Cu and Mn, respectively) were (re-)determined experimentally using conventional X-ray analysis to obtain electron density using a PLATON program. Cu affords a four-coordinated square planar geometry, while Mn affords a hexa-coordinated distorted octahedral geometry whose apical sites are occupied by an acetate ion and water ligands, which are associated with hydrogen bonds. The π-π or CH-π and hydrogen bonding intermolecular interactions were found in both crystals, which were also analyzed using a Hirshfeld surface analysis program. To compare these results with experimental results, a density functional theory (DFT) calculation was also carried out based on the crystal structures to obtain calculated electron density using a conventional Gaussian program. These results revealed that the axial Mn-O coordination bonds of Mn were relatively weaker than the in-plane M-N or M-O coordination bonds. MDPI 2021-01-21 /pmc/articles/PMC7865803/ /pubmed/33494463 http://dx.doi.org/10.3390/molecules26030551 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Communication Takiguchi, Yuji Onami, Yuika Haraguchi, Tomoyuki Akitsu, Takashiro Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs |
title | Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs |
title_full | Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs |
title_fullStr | Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs |
title_full_unstemmed | Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs |
title_short | Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs |
title_sort | crystallographic and computational electron density of d(x2-y2) orbitals of azo-schiff base metal complexes using conventional programs |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7865803/ https://www.ncbi.nlm.nih.gov/pubmed/33494463 http://dx.doi.org/10.3390/molecules26030551 |
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