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Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs

The crystal structures of two azobenzene derivative Schiff base metal complexes (new C(44)H(40)CuN(6)O(2) of P-1 and known C(44)H(38)MnN(6)O(7) of P2(1)/c abbreviated as Cu and Mn, respectively) were (re-)determined experimentally using conventional X-ray analysis to obtain electron density using a...

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Autores principales: Takiguchi, Yuji, Onami, Yuika, Haraguchi, Tomoyuki, Akitsu, Takashiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7865803/
https://www.ncbi.nlm.nih.gov/pubmed/33494463
http://dx.doi.org/10.3390/molecules26030551
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author Takiguchi, Yuji
Onami, Yuika
Haraguchi, Tomoyuki
Akitsu, Takashiro
author_facet Takiguchi, Yuji
Onami, Yuika
Haraguchi, Tomoyuki
Akitsu, Takashiro
author_sort Takiguchi, Yuji
collection PubMed
description The crystal structures of two azobenzene derivative Schiff base metal complexes (new C(44)H(40)CuN(6)O(2) of P-1 and known C(44)H(38)MnN(6)O(7) of P2(1)/c abbreviated as Cu and Mn, respectively) were (re-)determined experimentally using conventional X-ray analysis to obtain electron density using a PLATON program. Cu affords a four-coordinated square planar geometry, while Mn affords a hexa-coordinated distorted octahedral geometry whose apical sites are occupied by an acetate ion and water ligands, which are associated with hydrogen bonds. The π-π or CH-π and hydrogen bonding intermolecular interactions were found in both crystals, which were also analyzed using a Hirshfeld surface analysis program. To compare these results with experimental results, a density functional theory (DFT) calculation was also carried out based on the crystal structures to obtain calculated electron density using a conventional Gaussian program. These results revealed that the axial Mn-O coordination bonds of Mn were relatively weaker than the in-plane M-N or M-O coordination bonds.
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spelling pubmed-78658032021-02-07 Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs Takiguchi, Yuji Onami, Yuika Haraguchi, Tomoyuki Akitsu, Takashiro Molecules Communication The crystal structures of two azobenzene derivative Schiff base metal complexes (new C(44)H(40)CuN(6)O(2) of P-1 and known C(44)H(38)MnN(6)O(7) of P2(1)/c abbreviated as Cu and Mn, respectively) were (re-)determined experimentally using conventional X-ray analysis to obtain electron density using a PLATON program. Cu affords a four-coordinated square planar geometry, while Mn affords a hexa-coordinated distorted octahedral geometry whose apical sites are occupied by an acetate ion and water ligands, which are associated with hydrogen bonds. The π-π or CH-π and hydrogen bonding intermolecular interactions were found in both crystals, which were also analyzed using a Hirshfeld surface analysis program. To compare these results with experimental results, a density functional theory (DFT) calculation was also carried out based on the crystal structures to obtain calculated electron density using a conventional Gaussian program. These results revealed that the axial Mn-O coordination bonds of Mn were relatively weaker than the in-plane M-N or M-O coordination bonds. MDPI 2021-01-21 /pmc/articles/PMC7865803/ /pubmed/33494463 http://dx.doi.org/10.3390/molecules26030551 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Takiguchi, Yuji
Onami, Yuika
Haraguchi, Tomoyuki
Akitsu, Takashiro
Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs
title Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs
title_full Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs
title_fullStr Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs
title_full_unstemmed Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs
title_short Crystallographic and Computational Electron Density of d(x2-y2) Orbitals of Azo-Schiff Base Metal Complexes Using Conventional Programs
title_sort crystallographic and computational electron density of d(x2-y2) orbitals of azo-schiff base metal complexes using conventional programs
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7865803/
https://www.ncbi.nlm.nih.gov/pubmed/33494463
http://dx.doi.org/10.3390/molecules26030551
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