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Automatic segmentation of coronary lumen and external elastic membrane in intravascular ultrasound images using 8-layer U-Net

BACKGROUND: Intravascular ultrasound (IVUS) is the golden standard in accessing the coronary lesions, stenosis, and atherosclerosis plaques. In this paper, a fully automatic approach by an 8-layer U-Net is developed to segment the coronary artery lumen and the area bounded by external elastic membra...

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Autores principales: Dong, Liang, Jiang, Wenbing, Lu, Wei, Jiang, Jun, Zhao, Ya, Song, Xiangfen, Leng, Xiaochang, Zhao, Hang, Wang, Jian’an, Li, Changling, Xiang, Jianping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7866471/
https://www.ncbi.nlm.nih.gov/pubmed/33549115
http://dx.doi.org/10.1186/s12938-021-00852-0
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author Dong, Liang
Jiang, Wenbing
Lu, Wei
Jiang, Jun
Zhao, Ya
Song, Xiangfen
Leng, Xiaochang
Zhao, Hang
Wang, Jian’an
Li, Changling
Xiang, Jianping
author_facet Dong, Liang
Jiang, Wenbing
Lu, Wei
Jiang, Jun
Zhao, Ya
Song, Xiangfen
Leng, Xiaochang
Zhao, Hang
Wang, Jian’an
Li, Changling
Xiang, Jianping
author_sort Dong, Liang
collection PubMed
description BACKGROUND: Intravascular ultrasound (IVUS) is the golden standard in accessing the coronary lesions, stenosis, and atherosclerosis plaques. In this paper, a fully automatic approach by an 8-layer U-Net is developed to segment the coronary artery lumen and the area bounded by external elastic membrane (EEM), i.e., cross-sectional area (EEM-CSA). The database comprises single-vendor and single-frequency IVUS data. Particularly, the proposed data augmentation of MeshGrid combined with flip and rotation operations is implemented, improving the model performance without pre- or post-processing of the raw IVUS images. RESULTS: The mean intersection of union (MIoU) of 0.937 and 0.804 for the lumen and EEM-CSA, respectively, were achieved, which exceeded the manual labeling accuracy of the clinician. CONCLUSION: The accuracy shown by the proposed method is sufficient for subsequent reconstruction of 3D-IVUS images, which is essential for doctors’ diagnosis in the tissue characterization of coronary artery walls and plaque compositions, qualitatively and quantitatively.
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spelling pubmed-78664712021-02-08 Automatic segmentation of coronary lumen and external elastic membrane in intravascular ultrasound images using 8-layer U-Net Dong, Liang Jiang, Wenbing Lu, Wei Jiang, Jun Zhao, Ya Song, Xiangfen Leng, Xiaochang Zhao, Hang Wang, Jian’an Li, Changling Xiang, Jianping Biomed Eng Online Research BACKGROUND: Intravascular ultrasound (IVUS) is the golden standard in accessing the coronary lesions, stenosis, and atherosclerosis plaques. In this paper, a fully automatic approach by an 8-layer U-Net is developed to segment the coronary artery lumen and the area bounded by external elastic membrane (EEM), i.e., cross-sectional area (EEM-CSA). The database comprises single-vendor and single-frequency IVUS data. Particularly, the proposed data augmentation of MeshGrid combined with flip and rotation operations is implemented, improving the model performance without pre- or post-processing of the raw IVUS images. RESULTS: The mean intersection of union (MIoU) of 0.937 and 0.804 for the lumen and EEM-CSA, respectively, were achieved, which exceeded the manual labeling accuracy of the clinician. CONCLUSION: The accuracy shown by the proposed method is sufficient for subsequent reconstruction of 3D-IVUS images, which is essential for doctors’ diagnosis in the tissue characterization of coronary artery walls and plaque compositions, qualitatively and quantitatively. BioMed Central 2021-02-06 /pmc/articles/PMC7866471/ /pubmed/33549115 http://dx.doi.org/10.1186/s12938-021-00852-0 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Dong, Liang
Jiang, Wenbing
Lu, Wei
Jiang, Jun
Zhao, Ya
Song, Xiangfen
Leng, Xiaochang
Zhao, Hang
Wang, Jian’an
Li, Changling
Xiang, Jianping
Automatic segmentation of coronary lumen and external elastic membrane in intravascular ultrasound images using 8-layer U-Net
title Automatic segmentation of coronary lumen and external elastic membrane in intravascular ultrasound images using 8-layer U-Net
title_full Automatic segmentation of coronary lumen and external elastic membrane in intravascular ultrasound images using 8-layer U-Net
title_fullStr Automatic segmentation of coronary lumen and external elastic membrane in intravascular ultrasound images using 8-layer U-Net
title_full_unstemmed Automatic segmentation of coronary lumen and external elastic membrane in intravascular ultrasound images using 8-layer U-Net
title_short Automatic segmentation of coronary lumen and external elastic membrane in intravascular ultrasound images using 8-layer U-Net
title_sort automatic segmentation of coronary lumen and external elastic membrane in intravascular ultrasound images using 8-layer u-net
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7866471/
https://www.ncbi.nlm.nih.gov/pubmed/33549115
http://dx.doi.org/10.1186/s12938-021-00852-0
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