The complete chloroplast genome sequence of the medicinal plant, Angelica gigas (Apiaceae)

The complete chloroplast genome sequence of Angelica gigas, a traditional herbal plant used in treating diseases, was obtained by de novo assembly using illumina sequencing data (Illumina Inc., San Diego, CA). The circular molecule of the genome was constructed of four parts, with a size of 146,916 ...

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Autores principales: Choi, Sun A, Kim, YeJi, Kim, Kyu-Yeob, Kim, Jong Hwan, Seong, Rack Seon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7870150/
https://www.ncbi.nlm.nih.gov/pubmed/33614959
http://dx.doi.org/10.1080/23802359.2016.1166077
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author Choi, Sun A
Kim, YeJi
Kim, Kyu-Yeob
Kim, Jong Hwan
Seong, Rack Seon
author_facet Choi, Sun A
Kim, YeJi
Kim, Kyu-Yeob
Kim, Jong Hwan
Seong, Rack Seon
author_sort Choi, Sun A
collection PubMed
description The complete chloroplast genome sequence of Angelica gigas, a traditional herbal plant used in treating diseases, was obtained by de novo assembly using illumina sequencing data (Illumina Inc., San Diego, CA). The circular molecule of the genome was constructed of four parts, with a size of 146,916 bp in total – a large single copy (LSC) region of 93,118 bp, a small single copy (SSC) region of 17,582 bp and two inverted repeat (IRa and IRb) regions of 18,108 bp each. There were a total of 113 annotated genes, including 80 protein-coding genes, 29 tRNA genes and four rRNA genes. The phylogenetic result acquired through maximum parsimony analysis showed that A. gigas is closely related with A. decursiva and Seseli montanum.
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spelling pubmed-78701502021-02-18 The complete chloroplast genome sequence of the medicinal plant, Angelica gigas (Apiaceae) Choi, Sun A Kim, YeJi Kim, Kyu-Yeob Kim, Jong Hwan Seong, Rack Seon Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Angelica gigas, a traditional herbal plant used in treating diseases, was obtained by de novo assembly using illumina sequencing data (Illumina Inc., San Diego, CA). The circular molecule of the genome was constructed of four parts, with a size of 146,916 bp in total – a large single copy (LSC) region of 93,118 bp, a small single copy (SSC) region of 17,582 bp and two inverted repeat (IRa and IRb) regions of 18,108 bp each. There were a total of 113 annotated genes, including 80 protein-coding genes, 29 tRNA genes and four rRNA genes. The phylogenetic result acquired through maximum parsimony analysis showed that A. gigas is closely related with A. decursiva and Seseli montanum. Taylor & Francis 2016-04-11 /pmc/articles/PMC7870150/ /pubmed/33614959 http://dx.doi.org/10.1080/23802359.2016.1166077 Text en © 2016 [NIFDS]. Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Choi, Sun A
Kim, YeJi
Kim, Kyu-Yeob
Kim, Jong Hwan
Seong, Rack Seon
The complete chloroplast genome sequence of the medicinal plant, Angelica gigas (Apiaceae)
title The complete chloroplast genome sequence of the medicinal plant, Angelica gigas (Apiaceae)
title_full The complete chloroplast genome sequence of the medicinal plant, Angelica gigas (Apiaceae)
title_fullStr The complete chloroplast genome sequence of the medicinal plant, Angelica gigas (Apiaceae)
title_full_unstemmed The complete chloroplast genome sequence of the medicinal plant, Angelica gigas (Apiaceae)
title_short The complete chloroplast genome sequence of the medicinal plant, Angelica gigas (Apiaceae)
title_sort complete chloroplast genome sequence of the medicinal plant, angelica gigas (apiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7870150/
https://www.ncbi.nlm.nih.gov/pubmed/33614959
http://dx.doi.org/10.1080/23802359.2016.1166077
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