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Tracking COVID-19 using online search

Previous research has demonstrated that various properties of infectious diseases can be inferred from online search behaviour. In this work we use time series of online search query frequencies to gain insights about the prevalence of COVID-19 in multiple countries. We first develop unsupervised mo...

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Autores principales: Lampos, Vasileios, Majumder, Maimuna S., Yom-Tov, Elad, Edelstein, Michael, Moura, Simon, Hamada, Yohhei, Rangaka, Molebogeng X., McKendry, Rachel A., Cox, Ingemar J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7870878/
https://www.ncbi.nlm.nih.gov/pubmed/33558607
http://dx.doi.org/10.1038/s41746-021-00384-w
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author Lampos, Vasileios
Majumder, Maimuna S.
Yom-Tov, Elad
Edelstein, Michael
Moura, Simon
Hamada, Yohhei
Rangaka, Molebogeng X.
McKendry, Rachel A.
Cox, Ingemar J.
author_facet Lampos, Vasileios
Majumder, Maimuna S.
Yom-Tov, Elad
Edelstein, Michael
Moura, Simon
Hamada, Yohhei
Rangaka, Molebogeng X.
McKendry, Rachel A.
Cox, Ingemar J.
author_sort Lampos, Vasileios
collection PubMed
description Previous research has demonstrated that various properties of infectious diseases can be inferred from online search behaviour. In this work we use time series of online search query frequencies to gain insights about the prevalence of COVID-19 in multiple countries. We first develop unsupervised modelling techniques based on associated symptom categories identified by the United Kingdom’s National Health Service and Public Health England. We then attempt to minimise an expected bias in these signals caused by public interest—as opposed to infections—using the proportion of news media coverage devoted to COVID-19 as a proxy indicator. Our analysis indicates that models based on online searches precede the reported confirmed cases and deaths by 16.7 (10.2–23.2) and 22.1 (17.4–26.9) days, respectively. We also investigate transfer learning techniques for mapping supervised models from countries where the spread of the disease has progressed extensively to countries that are in earlier phases of their respective epidemic curves. Furthermore, we compare time series of online search activity against confirmed COVID-19 cases or deaths jointly across multiple countries, uncovering interesting querying patterns, including the finding that rarer symptoms are better predictors than common ones. Finally, we show that web searches improve the short-term forecasting accuracy of autoregressive models for COVID-19 deaths. Our work provides evidence that online search data can be used to develop complementary public health surveillance methods to help inform the COVID-19 response in conjunction with more established approaches.
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spelling pubmed-78708782021-02-11 Tracking COVID-19 using online search Lampos, Vasileios Majumder, Maimuna S. Yom-Tov, Elad Edelstein, Michael Moura, Simon Hamada, Yohhei Rangaka, Molebogeng X. McKendry, Rachel A. Cox, Ingemar J. NPJ Digit Med Article Previous research has demonstrated that various properties of infectious diseases can be inferred from online search behaviour. In this work we use time series of online search query frequencies to gain insights about the prevalence of COVID-19 in multiple countries. We first develop unsupervised modelling techniques based on associated symptom categories identified by the United Kingdom’s National Health Service and Public Health England. We then attempt to minimise an expected bias in these signals caused by public interest—as opposed to infections—using the proportion of news media coverage devoted to COVID-19 as a proxy indicator. Our analysis indicates that models based on online searches precede the reported confirmed cases and deaths by 16.7 (10.2–23.2) and 22.1 (17.4–26.9) days, respectively. We also investigate transfer learning techniques for mapping supervised models from countries where the spread of the disease has progressed extensively to countries that are in earlier phases of their respective epidemic curves. Furthermore, we compare time series of online search activity against confirmed COVID-19 cases or deaths jointly across multiple countries, uncovering interesting querying patterns, including the finding that rarer symptoms are better predictors than common ones. Finally, we show that web searches improve the short-term forecasting accuracy of autoregressive models for COVID-19 deaths. Our work provides evidence that online search data can be used to develop complementary public health surveillance methods to help inform the COVID-19 response in conjunction with more established approaches. Nature Publishing Group UK 2021-02-08 /pmc/articles/PMC7870878/ /pubmed/33558607 http://dx.doi.org/10.1038/s41746-021-00384-w Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lampos, Vasileios
Majumder, Maimuna S.
Yom-Tov, Elad
Edelstein, Michael
Moura, Simon
Hamada, Yohhei
Rangaka, Molebogeng X.
McKendry, Rachel A.
Cox, Ingemar J.
Tracking COVID-19 using online search
title Tracking COVID-19 using online search
title_full Tracking COVID-19 using online search
title_fullStr Tracking COVID-19 using online search
title_full_unstemmed Tracking COVID-19 using online search
title_short Tracking COVID-19 using online search
title_sort tracking covid-19 using online search
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7870878/
https://www.ncbi.nlm.nih.gov/pubmed/33558607
http://dx.doi.org/10.1038/s41746-021-00384-w
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