The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae)

We report the complete chloroplast genome sequence of the important nutritious millet crop Indian barnyard millet, Echinochloa frumentacea Link (Poaceae). The size of the circular chloroplast genome is 139 593 bp in length with a typical quadripartite structure, containing pair of inverted repeats o...

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Autores principales: Perumal, Sampath, Jayakodi, Murukarthick, Kim, Do-Soon, Yang, Tae-jin, Natesan, Senthil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
MitoGenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871652/
https://www.ncbi.nlm.nih.gov/pubmed/33644328
http://dx.doi.org/10.1080/23802359.2015.1137832
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author Perumal, Sampath
Jayakodi, Murukarthick
Kim, Do-Soon
Yang, Tae-jin
Natesan, Senthil
author_facet Perumal, Sampath
Jayakodi, Murukarthick
Kim, Do-Soon
Yang, Tae-jin
Natesan, Senthil
author_sort Perumal, Sampath
collection PubMed
description We report the complete chloroplast genome sequence of the important nutritious millet crop Indian barnyard millet, Echinochloa frumentacea Link (Poaceae). The size of the circular chloroplast genome is 139 593 bp in length with a typical quadripartite structure, containing pair of inverted repeats of 22 618 bp, flanked by large single copy and small single copy regions of 81 839 bp, 12 518 bp, respectively. Overall GC content of the genome was 38.6% and consists of 112 individual genes, including 77 protein coding genes, 30 tRNA genes, four rRNA genes and one conserved open reading frame. In addition, phylogenetic analysis with grass species has revealed that E. frumentacea is diverged around 1.9–2.7 million years with its close relatives, E. oryzicola and E. crus-galli.
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spelling pubmed-78716522021-02-26 The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae) Perumal, Sampath Jayakodi, Murukarthick Kim, Do-Soon Yang, Tae-jin Natesan, Senthil Mitochondrial DNA B Resour MitoGenome Announcement We report the complete chloroplast genome sequence of the important nutritious millet crop Indian barnyard millet, Echinochloa frumentacea Link (Poaceae). The size of the circular chloroplast genome is 139 593 bp in length with a typical quadripartite structure, containing pair of inverted repeats of 22 618 bp, flanked by large single copy and small single copy regions of 81 839 bp, 12 518 bp, respectively. Overall GC content of the genome was 38.6% and consists of 112 individual genes, including 77 protein coding genes, 30 tRNA genes, four rRNA genes and one conserved open reading frame. In addition, phylogenetic analysis with grass species has revealed that E. frumentacea is diverged around 1.9–2.7 million years with its close relatives, E. oryzicola and E. crus-galli. Taylor & Francis 2016-02-10 /pmc/articles/PMC7871652/ /pubmed/33644328 http://dx.doi.org/10.1080/23802359.2015.1137832 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle MitoGenome Announcement
Perumal, Sampath
Jayakodi, Murukarthick
Kim, Do-Soon
Yang, Tae-jin
Natesan, Senthil
The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae)
title The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae)
title_full The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae)
title_fullStr The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae)
title_full_unstemmed The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae)
title_short The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae)
title_sort complete chloroplast genome sequence of indian barnyard millet, echinochloa frumentacea (poaceae)
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871652/
https://www.ncbi.nlm.nih.gov/pubmed/33644328
http://dx.doi.org/10.1080/23802359.2015.1137832
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