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Complete mitochondrial genome of Kishi velvet shrimp, Metapenaeopsis dalei (Rathbun, 1902) (Crustacea: Decapoda: Penaeidae) in the East China Sea

We determined the complete mitochondrial genome of Metapenaeopsis dalei (Rathbun, 1902), which is collected from East China Sea (124°E and 33.5°N). Total mitochondrial genome length of M. dalei was 15 939 bp, in which 13 proteins, two ribosomal RNAs, 22 transfer RNAs and a putative control region we...

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Autores principales: Kim, Gyungryul, Yoon, Tae-Ho, Kang, Hye-Eun, Park, Won Gyu, Kim, Hak Jun, Choi, Jung-Hwa, Kim, Hyun-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871848/
https://www.ncbi.nlm.nih.gov/pubmed/33644330
http://dx.doi.org/10.1080/23802359.2016.1143341
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author Kim, Gyungryul
Yoon, Tae-Ho
Kang, Hye-Eun
Park, Won Gyu
Kim, Hak Jun
Choi, Jung-Hwa
Kim, Hyun-Woo
author_facet Kim, Gyungryul
Yoon, Tae-Ho
Kang, Hye-Eun
Park, Won Gyu
Kim, Hak Jun
Choi, Jung-Hwa
Kim, Hyun-Woo
author_sort Kim, Gyungryul
collection PubMed
description We determined the complete mitochondrial genome of Metapenaeopsis dalei (Rathbun, 1902), which is collected from East China Sea (124°E and 33.5°N). Total mitochondrial genome length of M. dalei was 15 939 bp, in which 13 proteins, two ribosomal RNAs, 22 transfer RNAs and a putative control region were encoded. The gene arrangement of M. dalei was well conserved with nine known Penaeidae mitochondrial genomes from COX1 to tRNA(Tyr). The protein-coding genes started with ATN except for COX1 in which ACG is used. Four genes (COX2, COX3, ND3 and ND5) exhibited an incomplete stop codon. Nucleotide sequence identity of M. dalei mitochondrial genome to those of nine Penaeidae species ranged from 78% to 80%. Based on the COI region, M. dalei is most closely related to Penaeus notialis.
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spelling pubmed-78718482021-02-26 Complete mitochondrial genome of Kishi velvet shrimp, Metapenaeopsis dalei (Rathbun, 1902) (Crustacea: Decapoda: Penaeidae) in the East China Sea Kim, Gyungryul Yoon, Tae-Ho Kang, Hye-Eun Park, Won Gyu Kim, Hak Jun Choi, Jung-Hwa Kim, Hyun-Woo Mitochondrial DNA B Resour Mitogenome Announcement We determined the complete mitochondrial genome of Metapenaeopsis dalei (Rathbun, 1902), which is collected from East China Sea (124°E and 33.5°N). Total mitochondrial genome length of M. dalei was 15 939 bp, in which 13 proteins, two ribosomal RNAs, 22 transfer RNAs and a putative control region were encoded. The gene arrangement of M. dalei was well conserved with nine known Penaeidae mitochondrial genomes from COX1 to tRNA(Tyr). The protein-coding genes started with ATN except for COX1 in which ACG is used. Four genes (COX2, COX3, ND3 and ND5) exhibited an incomplete stop codon. Nucleotide sequence identity of M. dalei mitochondrial genome to those of nine Penaeidae species ranged from 78% to 80%. Based on the COI region, M. dalei is most closely related to Penaeus notialis. Taylor & Francis 2016-03-28 /pmc/articles/PMC7871848/ /pubmed/33644330 http://dx.doi.org/10.1080/23802359.2016.1143341 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Kim, Gyungryul
Yoon, Tae-Ho
Kang, Hye-Eun
Park, Won Gyu
Kim, Hak Jun
Choi, Jung-Hwa
Kim, Hyun-Woo
Complete mitochondrial genome of Kishi velvet shrimp, Metapenaeopsis dalei (Rathbun, 1902) (Crustacea: Decapoda: Penaeidae) in the East China Sea
title Complete mitochondrial genome of Kishi velvet shrimp, Metapenaeopsis dalei (Rathbun, 1902) (Crustacea: Decapoda: Penaeidae) in the East China Sea
title_full Complete mitochondrial genome of Kishi velvet shrimp, Metapenaeopsis dalei (Rathbun, 1902) (Crustacea: Decapoda: Penaeidae) in the East China Sea
title_fullStr Complete mitochondrial genome of Kishi velvet shrimp, Metapenaeopsis dalei (Rathbun, 1902) (Crustacea: Decapoda: Penaeidae) in the East China Sea
title_full_unstemmed Complete mitochondrial genome of Kishi velvet shrimp, Metapenaeopsis dalei (Rathbun, 1902) (Crustacea: Decapoda: Penaeidae) in the East China Sea
title_short Complete mitochondrial genome of Kishi velvet shrimp, Metapenaeopsis dalei (Rathbun, 1902) (Crustacea: Decapoda: Penaeidae) in the East China Sea
title_sort complete mitochondrial genome of kishi velvet shrimp, metapenaeopsis dalei (rathbun, 1902) (crustacea: decapoda: penaeidae) in the east china sea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871848/
https://www.ncbi.nlm.nih.gov/pubmed/33644330
http://dx.doi.org/10.1080/23802359.2016.1143341
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