Complete mitochondrial genome of the Antarctic crocodile icefish, Chionodraco hamatus (Perciformes: Channichthyidae)

Antarctic icefish Chionodraco hamatus is an ideal model for studying cold adaptation mechanisms. The complete mitochondrial genome of C. hamatus was sequenced in this study. The genome sequence is 17 373 bp in length, which comprises 13 protein-coding genes, 22 tRNAs, two rRNAs and a control region....

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Yimeng, Chen, Liangbiao, Zhang, Dongsheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871858/
https://www.ncbi.nlm.nih.gov/pubmed/33644332
http://dx.doi.org/10.1080/23802359.2016.1144098
_version_ 1783649094876528640
author Liu, Yimeng
Chen, Liangbiao
Zhang, Dongsheng
author_facet Liu, Yimeng
Chen, Liangbiao
Zhang, Dongsheng
author_sort Liu, Yimeng
collection PubMed
description Antarctic icefish Chionodraco hamatus is an ideal model for studying cold adaptation mechanisms. The complete mitochondrial genome of C. hamatus was sequenced in this study. The genome sequence is 17 373 bp in length, which comprises 13 protein-coding genes, 22 tRNAs, two rRNAs and a control region. The overall base composition is A: 26.25%, T: 26.05%, G: 17.49% and C: 30.21%, with an A:T content of 52.3%. The phylogenetic analyses based on the concatenated nucleotide sequences of all the genes and control region supported a relatively close relationship with Parachaenichthys. charcoti. The complete mitochondrial genome sequence will be useful for evolutionary and functional studies of Antarctic Notothenioids.
format Online
Article
Text
id pubmed-7871858
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78718582021-02-26 Complete mitochondrial genome of the Antarctic crocodile icefish, Chionodraco hamatus (Perciformes: Channichthyidae) Liu, Yimeng Chen, Liangbiao Zhang, Dongsheng Mitochondrial DNA B Resour Mitogenome Announcement Antarctic icefish Chionodraco hamatus is an ideal model for studying cold adaptation mechanisms. The complete mitochondrial genome of C. hamatus was sequenced in this study. The genome sequence is 17 373 bp in length, which comprises 13 protein-coding genes, 22 tRNAs, two rRNAs and a control region. The overall base composition is A: 26.25%, T: 26.05%, G: 17.49% and C: 30.21%, with an A:T content of 52.3%. The phylogenetic analyses based on the concatenated nucleotide sequences of all the genes and control region supported a relatively close relationship with Parachaenichthys. charcoti. The complete mitochondrial genome sequence will be useful for evolutionary and functional studies of Antarctic Notothenioids. Taylor & Francis 2016-03-28 /pmc/articles/PMC7871858/ /pubmed/33644332 http://dx.doi.org/10.1080/23802359.2016.1144098 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Liu, Yimeng
Chen, Liangbiao
Zhang, Dongsheng
Complete mitochondrial genome of the Antarctic crocodile icefish, Chionodraco hamatus (Perciformes: Channichthyidae)
title Complete mitochondrial genome of the Antarctic crocodile icefish, Chionodraco hamatus (Perciformes: Channichthyidae)
title_full Complete mitochondrial genome of the Antarctic crocodile icefish, Chionodraco hamatus (Perciformes: Channichthyidae)
title_fullStr Complete mitochondrial genome of the Antarctic crocodile icefish, Chionodraco hamatus (Perciformes: Channichthyidae)
title_full_unstemmed Complete mitochondrial genome of the Antarctic crocodile icefish, Chionodraco hamatus (Perciformes: Channichthyidae)
title_short Complete mitochondrial genome of the Antarctic crocodile icefish, Chionodraco hamatus (Perciformes: Channichthyidae)
title_sort complete mitochondrial genome of the antarctic crocodile icefish, chionodraco hamatus (perciformes: channichthyidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871858/
https://www.ncbi.nlm.nih.gov/pubmed/33644332
http://dx.doi.org/10.1080/23802359.2016.1144098
work_keys_str_mv AT liuyimeng completemitochondrialgenomeoftheantarcticcrocodileicefishchionodracohamatusperciformeschannichthyidae
AT chenliangbiao completemitochondrialgenomeoftheantarcticcrocodileicefishchionodracohamatusperciformeschannichthyidae
AT zhangdongsheng completemitochondrialgenomeoftheantarcticcrocodileicefishchionodracohamatusperciformeschannichthyidae

Ejemplares similares