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Polymorphic sites in complete genome sequences of Asian badger, Meles leucurus amurensis (Mustelidae, Melinae) mitochondria

The badger is a common carnivorous animal maintain ecosystem by regulating the population of their prey. However, genomic information such as sequence polymorphisms has been restricted until recently. In this study, we have sequenced and assembled complete mitogenomes of Asian badgers, Meles leucuru...

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Autores principales: Hwang, Jae Yeon, Lee, Sang-Goo, Kim, Eun Bae
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871861/
https://www.ncbi.nlm.nih.gov/pubmed/33644355
http://dx.doi.org/10.1080/23802359.2016.1159932
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author Hwang, Jae Yeon
Lee, Sang-Goo
Kim, Eun Bae
author_facet Hwang, Jae Yeon
Lee, Sang-Goo
Kim, Eun Bae
author_sort Hwang, Jae Yeon
collection PubMed
description The badger is a common carnivorous animal maintain ecosystem by regulating the population of their prey. However, genomic information such as sequence polymorphisms has been restricted until recently. In this study, we have sequenced and assembled complete mitogenomes of Asian badgers, Meles leucurus amurensis, and polymorphic sites were identified. A total 182 singleton polymorphic sites were identified, and the 92 sites were located in protein-coding genes. Phylogenetic analysis showed that Asian badgers are evolutionary closed to Japanese badgers rather than European badgers. This study will provide important genomic information to assign taxon of species and to identify species of mustelids.
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spelling pubmed-78718612021-02-26 Polymorphic sites in complete genome sequences of Asian badger, Meles leucurus amurensis (Mustelidae, Melinae) mitochondria Hwang, Jae Yeon Lee, Sang-Goo Kim, Eun Bae Mitochondrial DNA B Resour Mitogenome Announcement The badger is a common carnivorous animal maintain ecosystem by regulating the population of their prey. However, genomic information such as sequence polymorphisms has been restricted until recently. In this study, we have sequenced and assembled complete mitogenomes of Asian badgers, Meles leucurus amurensis, and polymorphic sites were identified. A total 182 singleton polymorphic sites were identified, and the 92 sites were located in protein-coding genes. Phylogenetic analysis showed that Asian badgers are evolutionary closed to Japanese badgers rather than European badgers. This study will provide important genomic information to assign taxon of species and to identify species of mustelids. Taylor & Francis 2016-03-29 /pmc/articles/PMC7871861/ /pubmed/33644355 http://dx.doi.org/10.1080/23802359.2016.1159932 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Hwang, Jae Yeon
Lee, Sang-Goo
Kim, Eun Bae
Polymorphic sites in complete genome sequences of Asian badger, Meles leucurus amurensis (Mustelidae, Melinae) mitochondria
title Polymorphic sites in complete genome sequences of Asian badger, Meles leucurus amurensis (Mustelidae, Melinae) mitochondria
title_full Polymorphic sites in complete genome sequences of Asian badger, Meles leucurus amurensis (Mustelidae, Melinae) mitochondria
title_fullStr Polymorphic sites in complete genome sequences of Asian badger, Meles leucurus amurensis (Mustelidae, Melinae) mitochondria
title_full_unstemmed Polymorphic sites in complete genome sequences of Asian badger, Meles leucurus amurensis (Mustelidae, Melinae) mitochondria
title_short Polymorphic sites in complete genome sequences of Asian badger, Meles leucurus amurensis (Mustelidae, Melinae) mitochondria
title_sort polymorphic sites in complete genome sequences of asian badger, meles leucurus amurensis (mustelidae, melinae) mitochondria
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871861/
https://www.ncbi.nlm.nih.gov/pubmed/33644355
http://dx.doi.org/10.1080/23802359.2016.1159932
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