The complete chloroplast genome sequence of Rhus chinensis Mill (Anacardiaceae)

In this study, complete chloroplast genome sequences of Rhus chinensis was characterized by de novo assembly using whole genome sequence data. The chloroplast genome of R. chinensis were 149,011bp long, which was comprised of a large single copy region of 96,882 bp, a small single copy region of 18,...

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Autores principales: Lee, Yun Sun, Kim, Inseo, Kim, Jin-Kyung, Park, Jee Young, Joh, Ho Jun, Park, Hyun-Seung, Lee, Hyun Oh, Lee, Sang-Choon, Hur, Young-Jin, Yang, Tae-Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871870/
https://www.ncbi.nlm.nih.gov/pubmed/33644378
http://dx.doi.org/10.1080/23802359.2016.1222250
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author Lee, Yun Sun
Kim, Inseo
Kim, Jin-Kyung
Park, Jee Young
Joh, Ho Jun
Park, Hyun-Seung
Lee, Hyun Oh
Lee, Sang-Choon
Hur, Young-Jin
Yang, Tae-Jin
author_facet Lee, Yun Sun
Kim, Inseo
Kim, Jin-Kyung
Park, Jee Young
Joh, Ho Jun
Park, Hyun-Seung
Lee, Hyun Oh
Lee, Sang-Choon
Hur, Young-Jin
Yang, Tae-Jin
author_sort Lee, Yun Sun
collection PubMed
description In this study, complete chloroplast genome sequences of Rhus chinensis was characterized by de novo assembly using whole genome sequence data. The chloroplast genome of R. chinensis were 149,011bp long, which was comprised of a large single copy region of 96,882 bp, a small single copy region of 18,647bp, and a pair of inverted repeats of 16,741 bp. The genome contained 77 protein-coding genes, four rRNA genes and 30 tRNA genes. Phylogenetic tree revealed that R. chinensis was closely grouped with Spondias species, S. tuberosa and S. bahiensis, belonging to the Anacardiaceae family.
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spelling pubmed-78718702021-02-26 The complete chloroplast genome sequence of Rhus chinensis Mill (Anacardiaceae) Lee, Yun Sun Kim, Inseo Kim, Jin-Kyung Park, Jee Young Joh, Ho Jun Park, Hyun-Seung Lee, Hyun Oh Lee, Sang-Choon Hur, Young-Jin Yang, Tae-Jin Mitochondrial DNA B Resour Mitogenome Announcement In this study, complete chloroplast genome sequences of Rhus chinensis was characterized by de novo assembly using whole genome sequence data. The chloroplast genome of R. chinensis were 149,011bp long, which was comprised of a large single copy region of 96,882 bp, a small single copy region of 18,647bp, and a pair of inverted repeats of 16,741 bp. The genome contained 77 protein-coding genes, four rRNA genes and 30 tRNA genes. Phylogenetic tree revealed that R. chinensis was closely grouped with Spondias species, S. tuberosa and S. bahiensis, belonging to the Anacardiaceae family. Taylor & Francis 2016-09-01 /pmc/articles/PMC7871870/ /pubmed/33644378 http://dx.doi.org/10.1080/23802359.2016.1222250 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Lee, Yun Sun
Kim, Inseo
Kim, Jin-Kyung
Park, Jee Young
Joh, Ho Jun
Park, Hyun-Seung
Lee, Hyun Oh
Lee, Sang-Choon
Hur, Young-Jin
Yang, Tae-Jin
The complete chloroplast genome sequence of Rhus chinensis Mill (Anacardiaceae)
title The complete chloroplast genome sequence of Rhus chinensis Mill (Anacardiaceae)
title_full The complete chloroplast genome sequence of Rhus chinensis Mill (Anacardiaceae)
title_fullStr The complete chloroplast genome sequence of Rhus chinensis Mill (Anacardiaceae)
title_full_unstemmed The complete chloroplast genome sequence of Rhus chinensis Mill (Anacardiaceae)
title_short The complete chloroplast genome sequence of Rhus chinensis Mill (Anacardiaceae)
title_sort complete chloroplast genome sequence of rhus chinensis mill (anacardiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871870/
https://www.ncbi.nlm.nih.gov/pubmed/33644378
http://dx.doi.org/10.1080/23802359.2016.1222250
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