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The complete mitochondrial genome of the bambusicolous fungus Fusarium bambusae (Nectriaceae, Ascomycota)
The complete nucleotide sequence of the mitochondrial genome of the bambusicolous fungus Fusarium bambusae was determined using the next-generation sequencing technology. The circular molecule is 63,593 bp long with a GC content of 31.92%. Gene prediction revealed 44 genes encoding 15 conserved prot...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871986/ https://www.ncbi.nlm.nih.gov/pubmed/33644384 http://dx.doi.org/10.1080/23802359.2018.1522979 |
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author | Wang, Xin-Cun Zeng, Zhao-Qing Zhuang, Wen-Ying |
author_facet | Wang, Xin-Cun Zeng, Zhao-Qing Zhuang, Wen-Ying |
author_sort | Wang, Xin-Cun |
collection | PubMed |
description | The complete nucleotide sequence of the mitochondrial genome of the bambusicolous fungus Fusarium bambusae was determined using the next-generation sequencing technology. The circular molecule is 63,593 bp long with a GC content of 31.92%. Gene prediction revealed 44 genes encoding 15 conserved proteins, 27 tRNAs, and the large and small ribosomal RNAs. All genes are located on the same strand. The tRNA genes contain codons for all 20 standard amino acids. It turns out to be similar to the previously sequenced mitochondrial genomes of Fusarium circinatum and F. verticillioides. The differences lie in the number of introns embodied in protein-coding genes. Four introns exist in the mitochondrial genome of F. verticillioides, 10 in F. bambusae, and 14 in F. circinatum. The phylogenetic analysis confirmed F. bambusae as a member of Fusarium (Nectriaceae). The mitochondrial genome of F. bambusae will contribute to the understanding of phylogeny and evolution of the genus and family. |
format | Online Article Text |
id | pubmed-7871986 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78719862021-02-26 The complete mitochondrial genome of the bambusicolous fungus Fusarium bambusae (Nectriaceae, Ascomycota) Wang, Xin-Cun Zeng, Zhao-Qing Zhuang, Wen-Ying Mitochondrial DNA B Resour MitoGenome Announcement The complete nucleotide sequence of the mitochondrial genome of the bambusicolous fungus Fusarium bambusae was determined using the next-generation sequencing technology. The circular molecule is 63,593 bp long with a GC content of 31.92%. Gene prediction revealed 44 genes encoding 15 conserved proteins, 27 tRNAs, and the large and small ribosomal RNAs. All genes are located on the same strand. The tRNA genes contain codons for all 20 standard amino acids. It turns out to be similar to the previously sequenced mitochondrial genomes of Fusarium circinatum and F. verticillioides. The differences lie in the number of introns embodied in protein-coding genes. Four introns exist in the mitochondrial genome of F. verticillioides, 10 in F. bambusae, and 14 in F. circinatum. The phylogenetic analysis confirmed F. bambusae as a member of Fusarium (Nectriaceae). The mitochondrial genome of F. bambusae will contribute to the understanding of phylogeny and evolution of the genus and family. Taylor & Francis 2018-10-27 /pmc/articles/PMC7871986/ /pubmed/33644384 http://dx.doi.org/10.1080/23802359.2018.1522979 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | MitoGenome Announcement Wang, Xin-Cun Zeng, Zhao-Qing Zhuang, Wen-Ying The complete mitochondrial genome of the bambusicolous fungus Fusarium bambusae (Nectriaceae, Ascomycota) |
title | The complete mitochondrial genome of the bambusicolous fungus Fusarium bambusae (Nectriaceae, Ascomycota) |
title_full | The complete mitochondrial genome of the bambusicolous fungus Fusarium bambusae (Nectriaceae, Ascomycota) |
title_fullStr | The complete mitochondrial genome of the bambusicolous fungus Fusarium bambusae (Nectriaceae, Ascomycota) |
title_full_unstemmed | The complete mitochondrial genome of the bambusicolous fungus Fusarium bambusae (Nectriaceae, Ascomycota) |
title_short | The complete mitochondrial genome of the bambusicolous fungus Fusarium bambusae (Nectriaceae, Ascomycota) |
title_sort | complete mitochondrial genome of the bambusicolous fungus fusarium bambusae (nectriaceae, ascomycota) |
topic | MitoGenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7871986/ https://www.ncbi.nlm.nih.gov/pubmed/33644384 http://dx.doi.org/10.1080/23802359.2018.1522979 |
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