A gene-rich and compact chloroplast genome of the green alga Nephroselmis pyriformis (N.Carter) Ettl 1982 from the shores of Mersin (Eastern Mediterranean Sea)

We report the complete chloroplast genome of the MED1 strain of Nephroselmis pyriformis from the Eastern Mediterranean Sea. At 111,026 bp, this genome is smaller and more compact than those of Nephroselmis olivacea and Nephroselmis astigmatica, and in contrast to the latter taxa, its inverted repeat...

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Autores principales: Gastineau, Romain, Konucu, Merve, Tekdal, Dilek, Lemieux, Claude, Turmel, Monique, Witkowski, Andrzej, Eker-Develi, Elif
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872528/
https://www.ncbi.nlm.nih.gov/pubmed/33659658
http://dx.doi.org/10.1080/23802359.2020.1866461
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author Gastineau, Romain
Konucu, Merve
Tekdal, Dilek
Lemieux, Claude
Turmel, Monique
Witkowski, Andrzej
Eker-Develi, Elif
author_facet Gastineau, Romain
Konucu, Merve
Tekdal, Dilek
Lemieux, Claude
Turmel, Monique
Witkowski, Andrzej
Eker-Develi, Elif
author_sort Gastineau, Romain
collection PubMed
description We report the complete chloroplast genome of the MED1 strain of Nephroselmis pyriformis from the Eastern Mediterranean Sea. At 111,026 bp, this genome is smaller and more compact than those of Nephroselmis olivacea and Nephroselmis astigmatica, and in contrast to the latter taxa, its inverted repeat contains no complete protein-coding genes. It encodes 3 rRNAs, 33 tRNAs and 94 proteins. Maximum likelihood analysis of a concatenated set of chloroplast genes from green algae belonging to deep-diverging lineages positioned the three Nephroselmis species in a strongly supported clade in which N. pyriformis is sister to N. astigmatica.
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spelling pubmed-78725282021-03-02 A gene-rich and compact chloroplast genome of the green alga Nephroselmis pyriformis (N.Carter) Ettl 1982 from the shores of Mersin (Eastern Mediterranean Sea) Gastineau, Romain Konucu, Merve Tekdal, Dilek Lemieux, Claude Turmel, Monique Witkowski, Andrzej Eker-Develi, Elif Mitochondrial DNA B Resour Mitogenome Announcement We report the complete chloroplast genome of the MED1 strain of Nephroselmis pyriformis from the Eastern Mediterranean Sea. At 111,026 bp, this genome is smaller and more compact than those of Nephroselmis olivacea and Nephroselmis astigmatica, and in contrast to the latter taxa, its inverted repeat contains no complete protein-coding genes. It encodes 3 rRNAs, 33 tRNAs and 94 proteins. Maximum likelihood analysis of a concatenated set of chloroplast genes from green algae belonging to deep-diverging lineages positioned the three Nephroselmis species in a strongly supported clade in which N. pyriformis is sister to N. astigmatica. Taylor & Francis 2021-02-05 /pmc/articles/PMC7872528/ /pubmed/33659658 http://dx.doi.org/10.1080/23802359.2020.1866461 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Gastineau, Romain
Konucu, Merve
Tekdal, Dilek
Lemieux, Claude
Turmel, Monique
Witkowski, Andrzej
Eker-Develi, Elif
A gene-rich and compact chloroplast genome of the green alga Nephroselmis pyriformis (N.Carter) Ettl 1982 from the shores of Mersin (Eastern Mediterranean Sea)
title A gene-rich and compact chloroplast genome of the green alga Nephroselmis pyriformis (N.Carter) Ettl 1982 from the shores of Mersin (Eastern Mediterranean Sea)
title_full A gene-rich and compact chloroplast genome of the green alga Nephroselmis pyriformis (N.Carter) Ettl 1982 from the shores of Mersin (Eastern Mediterranean Sea)
title_fullStr A gene-rich and compact chloroplast genome of the green alga Nephroselmis pyriformis (N.Carter) Ettl 1982 from the shores of Mersin (Eastern Mediterranean Sea)
title_full_unstemmed A gene-rich and compact chloroplast genome of the green alga Nephroselmis pyriformis (N.Carter) Ettl 1982 from the shores of Mersin (Eastern Mediterranean Sea)
title_short A gene-rich and compact chloroplast genome of the green alga Nephroselmis pyriformis (N.Carter) Ettl 1982 from the shores of Mersin (Eastern Mediterranean Sea)
title_sort gene-rich and compact chloroplast genome of the green alga nephroselmis pyriformis (n.carter) ettl 1982 from the shores of mersin (eastern mediterranean sea)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872528/
https://www.ncbi.nlm.nih.gov/pubmed/33659658
http://dx.doi.org/10.1080/23802359.2020.1866461
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