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Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate

Gardenia jasminoides Ellis is a traditional aromatic and medicinal plant in China. Here, the complete chloroplast genome of a wild-type gardenia adapted to island climate was assembled. The assembled genome was 155,247 bp in length, with four typical regions, i.e., a large single-copy (LSC) region (...

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Autores principales: Zhang, Min, Chen, Wan-Dong, Li, Yuan-Yuan, Zhang, Cheng, Chai, Zi-Han, Li, Yong-Fu, Xie, Shang-Wei, Deng, Shao-Yong, Duan, Yi-Fan, Wang, Xian-Rong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872548/
https://www.ncbi.nlm.nih.gov/pubmed/33659660
http://dx.doi.org/10.1080/23802359.2020.1861997
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author Zhang, Min
Chen, Wan-Dong
Li, Yuan-Yuan
Zhang, Cheng
Chai, Zi-Han
Li, Yong-Fu
Xie, Shang-Wei
Deng, Shao-Yong
Duan, Yi-Fan
Wang, Xian-Rong
author_facet Zhang, Min
Chen, Wan-Dong
Li, Yuan-Yuan
Zhang, Cheng
Chai, Zi-Han
Li, Yong-Fu
Xie, Shang-Wei
Deng, Shao-Yong
Duan, Yi-Fan
Wang, Xian-Rong
author_sort Zhang, Min
collection PubMed
description Gardenia jasminoides Ellis is a traditional aromatic and medicinal plant in China. Here, the complete chloroplast genome of a wild-type gardenia adapted to island climate was assembled. The assembled genome was 155,247 bp in length, with four typical regions, i.e., a large single-copy (LSC) region (85,414 bp), a small single-copy (SSC) region (18,235 bp) and two inverted repeats (IRs) regions (25,799 bp each). In total, 138 genes were predicted, including 90 protein-coding genes, 40 tRNA genes and eight rRNA genes. The overall GC content of the chloroplast genome was 37.5%. The chloroplast genome would provide more information for the phylogeography and phylogeny study of G. jasminoides.
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spelling pubmed-78725482021-03-02 Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate Zhang, Min Chen, Wan-Dong Li, Yuan-Yuan Zhang, Cheng Chai, Zi-Han Li, Yong-Fu Xie, Shang-Wei Deng, Shao-Yong Duan, Yi-Fan Wang, Xian-Rong Mitochondrial DNA B Resour Mitogenome Announcement Gardenia jasminoides Ellis is a traditional aromatic and medicinal plant in China. Here, the complete chloroplast genome of a wild-type gardenia adapted to island climate was assembled. The assembled genome was 155,247 bp in length, with four typical regions, i.e., a large single-copy (LSC) region (85,414 bp), a small single-copy (SSC) region (18,235 bp) and two inverted repeats (IRs) regions (25,799 bp each). In total, 138 genes were predicted, including 90 protein-coding genes, 40 tRNA genes and eight rRNA genes. The overall GC content of the chloroplast genome was 37.5%. The chloroplast genome would provide more information for the phylogeography and phylogeny study of G. jasminoides. Taylor & Francis 2021-02-03 /pmc/articles/PMC7872548/ /pubmed/33659660 http://dx.doi.org/10.1080/23802359.2020.1861997 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Min
Chen, Wan-Dong
Li, Yuan-Yuan
Zhang, Cheng
Chai, Zi-Han
Li, Yong-Fu
Xie, Shang-Wei
Deng, Shao-Yong
Duan, Yi-Fan
Wang, Xian-Rong
Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate
title Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate
title_full Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate
title_fullStr Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate
title_full_unstemmed Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate
title_short Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate
title_sort complete chloroplast genome of a wild-type gardenia jasminoides ellis (rubiaceae) adapted to island climate
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872548/
https://www.ncbi.nlm.nih.gov/pubmed/33659660
http://dx.doi.org/10.1080/23802359.2020.1861997
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