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Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate
Gardenia jasminoides Ellis is a traditional aromatic and medicinal plant in China. Here, the complete chloroplast genome of a wild-type gardenia adapted to island climate was assembled. The assembled genome was 155,247 bp in length, with four typical regions, i.e., a large single-copy (LSC) region (...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872548/ https://www.ncbi.nlm.nih.gov/pubmed/33659660 http://dx.doi.org/10.1080/23802359.2020.1861997 |
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author | Zhang, Min Chen, Wan-Dong Li, Yuan-Yuan Zhang, Cheng Chai, Zi-Han Li, Yong-Fu Xie, Shang-Wei Deng, Shao-Yong Duan, Yi-Fan Wang, Xian-Rong |
author_facet | Zhang, Min Chen, Wan-Dong Li, Yuan-Yuan Zhang, Cheng Chai, Zi-Han Li, Yong-Fu Xie, Shang-Wei Deng, Shao-Yong Duan, Yi-Fan Wang, Xian-Rong |
author_sort | Zhang, Min |
collection | PubMed |
description | Gardenia jasminoides Ellis is a traditional aromatic and medicinal plant in China. Here, the complete chloroplast genome of a wild-type gardenia adapted to island climate was assembled. The assembled genome was 155,247 bp in length, with four typical regions, i.e., a large single-copy (LSC) region (85,414 bp), a small single-copy (SSC) region (18,235 bp) and two inverted repeats (IRs) regions (25,799 bp each). In total, 138 genes were predicted, including 90 protein-coding genes, 40 tRNA genes and eight rRNA genes. The overall GC content of the chloroplast genome was 37.5%. The chloroplast genome would provide more information for the phylogeography and phylogeny study of G. jasminoides. |
format | Online Article Text |
id | pubmed-7872548 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78725482021-03-02 Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate Zhang, Min Chen, Wan-Dong Li, Yuan-Yuan Zhang, Cheng Chai, Zi-Han Li, Yong-Fu Xie, Shang-Wei Deng, Shao-Yong Duan, Yi-Fan Wang, Xian-Rong Mitochondrial DNA B Resour Mitogenome Announcement Gardenia jasminoides Ellis is a traditional aromatic and medicinal plant in China. Here, the complete chloroplast genome of a wild-type gardenia adapted to island climate was assembled. The assembled genome was 155,247 bp in length, with four typical regions, i.e., a large single-copy (LSC) region (85,414 bp), a small single-copy (SSC) region (18,235 bp) and two inverted repeats (IRs) regions (25,799 bp each). In total, 138 genes were predicted, including 90 protein-coding genes, 40 tRNA genes and eight rRNA genes. The overall GC content of the chloroplast genome was 37.5%. The chloroplast genome would provide more information for the phylogeography and phylogeny study of G. jasminoides. Taylor & Francis 2021-02-03 /pmc/articles/PMC7872548/ /pubmed/33659660 http://dx.doi.org/10.1080/23802359.2020.1861997 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Min Chen, Wan-Dong Li, Yuan-Yuan Zhang, Cheng Chai, Zi-Han Li, Yong-Fu Xie, Shang-Wei Deng, Shao-Yong Duan, Yi-Fan Wang, Xian-Rong Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
title | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
title_full | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
title_fullStr | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
title_full_unstemmed | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
title_short | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
title_sort | complete chloroplast genome of a wild-type gardenia jasminoides ellis (rubiaceae) adapted to island climate |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872548/ https://www.ncbi.nlm.nih.gov/pubmed/33659660 http://dx.doi.org/10.1080/23802359.2020.1861997 |
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