Complete chloroplast genome sequences of two Alloteropsis species (Poaceae) from China

Alloteropsis is a widely-distributed genus with C(3) and C(4) photosynthetic species belonging to the Poaceae family. This study characterized the complete chloroplast genomes of two Alloteropsis species from Chinese mainland, i.e. Alloteropsis semialata with C(4) photosynthetic type and Alloteropsi...

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Autores principales: Yang, Yang, Zhang, Xianzhi, Chen, Siyun, Guo, Zhenhua, Wang, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872562/
https://www.ncbi.nlm.nih.gov/pubmed/33659679
http://dx.doi.org/10.1080/23802359.2020.1867014
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author Yang, Yang
Zhang, Xianzhi
Chen, Siyun
Guo, Zhenhua
Wang, Li
author_facet Yang, Yang
Zhang, Xianzhi
Chen, Siyun
Guo, Zhenhua
Wang, Li
author_sort Yang, Yang
collection PubMed
description Alloteropsis is a widely-distributed genus with C(3) and C(4) photosynthetic species belonging to the Poaceae family. This study characterized the complete chloroplast genomes of two Alloteropsis species from Chinese mainland, i.e. Alloteropsis semialata with C(4) photosynthetic type and Alloteropsis cimicina with C(3) photosynthetic type. The chloroplast genomes of A. semialata and A. cimicina are 138,188 bp and 139,335 bp in length, with 38.48% and 38.59% GC contents, respectively. These two chloroplast genomes contain the same number of genes, i.e. 107 unique genes including 27 tRNA, 4 rRNA, and 76 protein-coding genes. Phylogenomic analysis confirmed the species identity of A. semialata and A. cimicina and supported a close relationship of Alloteropsis with species of Setaria and Panicum in grass family.
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spelling pubmed-78725622021-03-02 Complete chloroplast genome sequences of two Alloteropsis species (Poaceae) from China Yang, Yang Zhang, Xianzhi Chen, Siyun Guo, Zhenhua Wang, Li Mitochondrial DNA B Resour Mitogenome Announcement Alloteropsis is a widely-distributed genus with C(3) and C(4) photosynthetic species belonging to the Poaceae family. This study characterized the complete chloroplast genomes of two Alloteropsis species from Chinese mainland, i.e. Alloteropsis semialata with C(4) photosynthetic type and Alloteropsis cimicina with C(3) photosynthetic type. The chloroplast genomes of A. semialata and A. cimicina are 138,188 bp and 139,335 bp in length, with 38.48% and 38.59% GC contents, respectively. These two chloroplast genomes contain the same number of genes, i.e. 107 unique genes including 27 tRNA, 4 rRNA, and 76 protein-coding genes. Phylogenomic analysis confirmed the species identity of A. semialata and A. cimicina and supported a close relationship of Alloteropsis with species of Setaria and Panicum in grass family. Taylor & Francis 2021-02-08 /pmc/articles/PMC7872562/ /pubmed/33659679 http://dx.doi.org/10.1080/23802359.2020.1867014 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Yang
Zhang, Xianzhi
Chen, Siyun
Guo, Zhenhua
Wang, Li
Complete chloroplast genome sequences of two Alloteropsis species (Poaceae) from China
title Complete chloroplast genome sequences of two Alloteropsis species (Poaceae) from China
title_full Complete chloroplast genome sequences of two Alloteropsis species (Poaceae) from China
title_fullStr Complete chloroplast genome sequences of two Alloteropsis species (Poaceae) from China
title_full_unstemmed Complete chloroplast genome sequences of two Alloteropsis species (Poaceae) from China
title_short Complete chloroplast genome sequences of two Alloteropsis species (Poaceae) from China
title_sort complete chloroplast genome sequences of two alloteropsis species (poaceae) from china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872562/
https://www.ncbi.nlm.nih.gov/pubmed/33659679
http://dx.doi.org/10.1080/23802359.2020.1867014
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