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Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc
Zingiber mioga (Thunb.) Rosc. is an important plant species in tropical Asia widely used for decoration, and in traditional food and medicine. In this study, we reported for the first time the complete chloroplast genome sequence of Z. mioga. The assembled chloroplast genome was 159,868 bp long with...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872563/ https://www.ncbi.nlm.nih.gov/pubmed/33659662 http://dx.doi.org/10.1080/23802359.2020.1866466 |
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author | Miao, Yeminzi Chen, Limin Li, Hanmei Zhou, Dayun Pan, Yiming Liu, Tingfu |
author_facet | Miao, Yeminzi Chen, Limin Li, Hanmei Zhou, Dayun Pan, Yiming Liu, Tingfu |
author_sort | Miao, Yeminzi |
collection | PubMed |
description | Zingiber mioga (Thunb.) Rosc. is an important plant species in tropical Asia widely used for decoration, and in traditional food and medicine. In this study, we reported for the first time the complete chloroplast genome sequence of Z. mioga. The assembled chloroplast genome was 159,868 bp long with a typical quadripartite structure consisting of two reverse repeated regions of 26,652 bp in length, separated by a large single-copy (89,431 bp) and a small single-copy (17,133 bp) region. We annotated 113 genes including 78 protein-coding, 31 tRNA and 4 rRNA genes. Phylogenetic analysis with 27 other species showed that Z. mioga clustered with Z. officinale and Z. spectabile, all belonging to the Zingiberaceae family of the Zingiberales order. The results of this study will facilitate the breeding process and conservation of the species. |
format | Online Article Text |
id | pubmed-7872563 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78725632021-03-02 Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc Miao, Yeminzi Chen, Limin Li, Hanmei Zhou, Dayun Pan, Yiming Liu, Tingfu Mitochondrial DNA B Resour Mitogenome Announcement Zingiber mioga (Thunb.) Rosc. is an important plant species in tropical Asia widely used for decoration, and in traditional food and medicine. In this study, we reported for the first time the complete chloroplast genome sequence of Z. mioga. The assembled chloroplast genome was 159,868 bp long with a typical quadripartite structure consisting of two reverse repeated regions of 26,652 bp in length, separated by a large single-copy (89,431 bp) and a small single-copy (17,133 bp) region. We annotated 113 genes including 78 protein-coding, 31 tRNA and 4 rRNA genes. Phylogenetic analysis with 27 other species showed that Z. mioga clustered with Z. officinale and Z. spectabile, all belonging to the Zingiberaceae family of the Zingiberales order. The results of this study will facilitate the breeding process and conservation of the species. Taylor & Francis 2021-02-04 /pmc/articles/PMC7872563/ /pubmed/33659662 http://dx.doi.org/10.1080/23802359.2020.1866466 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Miao, Yeminzi Chen, Limin Li, Hanmei Zhou, Dayun Pan, Yiming Liu, Tingfu Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc |
title | Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc |
title_full | Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc |
title_fullStr | Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc |
title_full_unstemmed | Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc |
title_short | Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc |
title_sort | characterization of the chloroplast genome of zingiber mioga (thunb.) rosc |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872563/ https://www.ncbi.nlm.nih.gov/pubmed/33659662 http://dx.doi.org/10.1080/23802359.2020.1866466 |
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