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Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc

Zingiber mioga (Thunb.) Rosc. is an important plant species in tropical Asia widely used for decoration, and in traditional food and medicine. In this study, we reported for the first time the complete chloroplast genome sequence of Z. mioga. The assembled chloroplast genome was 159,868 bp long with...

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Autores principales: Miao, Yeminzi, Chen, Limin, Li, Hanmei, Zhou, Dayun, Pan, Yiming, Liu, Tingfu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872563/
https://www.ncbi.nlm.nih.gov/pubmed/33659662
http://dx.doi.org/10.1080/23802359.2020.1866466
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author Miao, Yeminzi
Chen, Limin
Li, Hanmei
Zhou, Dayun
Pan, Yiming
Liu, Tingfu
author_facet Miao, Yeminzi
Chen, Limin
Li, Hanmei
Zhou, Dayun
Pan, Yiming
Liu, Tingfu
author_sort Miao, Yeminzi
collection PubMed
description Zingiber mioga (Thunb.) Rosc. is an important plant species in tropical Asia widely used for decoration, and in traditional food and medicine. In this study, we reported for the first time the complete chloroplast genome sequence of Z. mioga. The assembled chloroplast genome was 159,868 bp long with a typical quadripartite structure consisting of two reverse repeated regions of 26,652 bp in length, separated by a large single-copy (89,431 bp) and a small single-copy (17,133 bp) region. We annotated 113 genes including 78 protein-coding, 31 tRNA and 4 rRNA genes. Phylogenetic analysis with 27 other species showed that Z. mioga clustered with Z. officinale and Z. spectabile, all belonging to the Zingiberaceae family of the Zingiberales order. The results of this study will facilitate the breeding process and conservation of the species.
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spelling pubmed-78725632021-03-02 Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc Miao, Yeminzi Chen, Limin Li, Hanmei Zhou, Dayun Pan, Yiming Liu, Tingfu Mitochondrial DNA B Resour Mitogenome Announcement Zingiber mioga (Thunb.) Rosc. is an important plant species in tropical Asia widely used for decoration, and in traditional food and medicine. In this study, we reported for the first time the complete chloroplast genome sequence of Z. mioga. The assembled chloroplast genome was 159,868 bp long with a typical quadripartite structure consisting of two reverse repeated regions of 26,652 bp in length, separated by a large single-copy (89,431 bp) and a small single-copy (17,133 bp) region. We annotated 113 genes including 78 protein-coding, 31 tRNA and 4 rRNA genes. Phylogenetic analysis with 27 other species showed that Z. mioga clustered with Z. officinale and Z. spectabile, all belonging to the Zingiberaceae family of the Zingiberales order. The results of this study will facilitate the breeding process and conservation of the species. Taylor & Francis 2021-02-04 /pmc/articles/PMC7872563/ /pubmed/33659662 http://dx.doi.org/10.1080/23802359.2020.1866466 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Miao, Yeminzi
Chen, Limin
Li, Hanmei
Zhou, Dayun
Pan, Yiming
Liu, Tingfu
Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc
title Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc
title_full Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc
title_fullStr Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc
title_full_unstemmed Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc
title_short Characterization of the chloroplast genome of Zingiber mioga (Thunb.) Rosc
title_sort characterization of the chloroplast genome of zingiber mioga (thunb.) rosc
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872563/
https://www.ncbi.nlm.nih.gov/pubmed/33659662
http://dx.doi.org/10.1080/23802359.2020.1866466
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