Chloroplast phylogenomic analysis provides insights into the evolution of Paris liiana sp. nov

Paris liiana sp. nov is a species of flowering herb of the genus Paris and widely distributed in the southwest of China. In this study, we sequenced the complete chloroplast (cp) genome of P. liiana sp. nov to investigate its phylogenetic relationship in genus Paris. The cp genome of P. liiana sp. n...

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Autores principales: Guan, Xin, Yang, Qingshu, Wang, Shuang, Zhang, Haizhu, Xia, Conglong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872569/
https://www.ncbi.nlm.nih.gov/pubmed/33659673
http://dx.doi.org/10.1080/23802359.2020.1867016
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author Guan, Xin
Yang, Qingshu
Wang, Shuang
Zhang, Haizhu
Xia, Conglong
author_facet Guan, Xin
Yang, Qingshu
Wang, Shuang
Zhang, Haizhu
Xia, Conglong
author_sort Guan, Xin
collection PubMed
description Paris liiana sp. nov is a species of flowering herb of the genus Paris and widely distributed in the southwest of China. In this study, we sequenced the complete chloroplast (cp) genome of P. liiana sp. nov to investigate its phylogenetic relationship in genus Paris. The cp genome of P. liiana sp. nov was 163,860 bp in length, containing a large single-copy (LSC) region of 84,415 bp, a small single-copy (SSC) region of 12,947 bp, and a pair of inverted repeats (IRs) region of 33,249 bp. The overall GC content was 37.0%. The genome comprises of 135 genes, including 91 protein-coding genes, 37 tRNA genes, and 4 rRNA genes. Phylogenetic relationship analysis based on complete cp genome sequences exhibited that P. liiana sp. nov was most related to P. polyphylla var. yunnanensis.
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spelling pubmed-78725692021-03-02 Chloroplast phylogenomic analysis provides insights into the evolution of Paris liiana sp. nov Guan, Xin Yang, Qingshu Wang, Shuang Zhang, Haizhu Xia, Conglong Mitochondrial DNA B Resour Mitogenome Announcement Paris liiana sp. nov is a species of flowering herb of the genus Paris and widely distributed in the southwest of China. In this study, we sequenced the complete chloroplast (cp) genome of P. liiana sp. nov to investigate its phylogenetic relationship in genus Paris. The cp genome of P. liiana sp. nov was 163,860 bp in length, containing a large single-copy (LSC) region of 84,415 bp, a small single-copy (SSC) region of 12,947 bp, and a pair of inverted repeats (IRs) region of 33,249 bp. The overall GC content was 37.0%. The genome comprises of 135 genes, including 91 protein-coding genes, 37 tRNA genes, and 4 rRNA genes. Phylogenetic relationship analysis based on complete cp genome sequences exhibited that P. liiana sp. nov was most related to P. polyphylla var. yunnanensis. Taylor & Francis 2021-02-08 /pmc/articles/PMC7872569/ /pubmed/33659673 http://dx.doi.org/10.1080/23802359.2020.1867016 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Guan, Xin
Yang, Qingshu
Wang, Shuang
Zhang, Haizhu
Xia, Conglong
Chloroplast phylogenomic analysis provides insights into the evolution of Paris liiana sp. nov
title Chloroplast phylogenomic analysis provides insights into the evolution of Paris liiana sp. nov
title_full Chloroplast phylogenomic analysis provides insights into the evolution of Paris liiana sp. nov
title_fullStr Chloroplast phylogenomic analysis provides insights into the evolution of Paris liiana sp. nov
title_full_unstemmed Chloroplast phylogenomic analysis provides insights into the evolution of Paris liiana sp. nov
title_short Chloroplast phylogenomic analysis provides insights into the evolution of Paris liiana sp. nov
title_sort chloroplast phylogenomic analysis provides insights into the evolution of paris liiana sp. nov
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872569/
https://www.ncbi.nlm.nih.gov/pubmed/33659673
http://dx.doi.org/10.1080/23802359.2020.1867016
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