The complete chloroplast genome of Zanthoxylum piasezkii Maxim. (Rutaceae) and its phylogenetic analysis

Zanthoxylum piasezkii Maxim. is a widely distributed species of edible medicinal plant in China. It has been used for traditional spicy condiment and medicinal ingredients for quite a long time. In this study, the complete chloroplast genome sequence of Z. piasezkii was first reported and characteri...

Descripción completa

Detalles Bibliográficos
Autores principales: Sun, Chong, Liu, Xia, Dong, Peng, Kuang, Mi, Chen, Zexiong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872585/
https://www.ncbi.nlm.nih.gov/pubmed/33659657
http://dx.doi.org/10.1080/23802359.2020.1866458
_version_ 1783649217676312576
author Sun, Chong
Liu, Xia
Dong, Peng
Kuang, Mi
Chen, Zexiong
author_facet Sun, Chong
Liu, Xia
Dong, Peng
Kuang, Mi
Chen, Zexiong
author_sort Sun, Chong
collection PubMed
description Zanthoxylum piasezkii Maxim. is a widely distributed species of edible medicinal plant in China. It has been used for traditional spicy condiment and medicinal ingredients for quite a long time. In this study, the complete chloroplast genome sequence of Z. piasezkii was first reported and characterized from sequencing data. The complete chloroplast genome was determined to be 158,728 bp in length, consisting of a large single-copy (LSC) region (85,918 bp) and a small single copy (SSC) region (17,612 bp), which were separated by a pair of 27,599 bp inverted repeat (IR) regions. The chloroplast genome is predicted to contain 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of cpDNA is 38.4%. The phylogenetic analysis of 12 complete chloroplast genomes reveals that Z. piasezkii is mostly related to the congeneric Z. bungeanum.
format Online
Article
Text
id pubmed-7872585
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78725852021-03-02 The complete chloroplast genome of Zanthoxylum piasezkii Maxim. (Rutaceae) and its phylogenetic analysis Sun, Chong Liu, Xia Dong, Peng Kuang, Mi Chen, Zexiong Mitochondrial DNA B Resour Mitogenome Announcement Zanthoxylum piasezkii Maxim. is a widely distributed species of edible medicinal plant in China. It has been used for traditional spicy condiment and medicinal ingredients for quite a long time. In this study, the complete chloroplast genome sequence of Z. piasezkii was first reported and characterized from sequencing data. The complete chloroplast genome was determined to be 158,728 bp in length, consisting of a large single-copy (LSC) region (85,918 bp) and a small single copy (SSC) region (17,612 bp), which were separated by a pair of 27,599 bp inverted repeat (IR) regions. The chloroplast genome is predicted to contain 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of cpDNA is 38.4%. The phylogenetic analysis of 12 complete chloroplast genomes reveals that Z. piasezkii is mostly related to the congeneric Z. bungeanum. Taylor & Francis 2021-02-05 /pmc/articles/PMC7872585/ /pubmed/33659657 http://dx.doi.org/10.1080/23802359.2020.1866458 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Sun, Chong
Liu, Xia
Dong, Peng
Kuang, Mi
Chen, Zexiong
The complete chloroplast genome of Zanthoxylum piasezkii Maxim. (Rutaceae) and its phylogenetic analysis
title The complete chloroplast genome of Zanthoxylum piasezkii Maxim. (Rutaceae) and its phylogenetic analysis
title_full The complete chloroplast genome of Zanthoxylum piasezkii Maxim. (Rutaceae) and its phylogenetic analysis
title_fullStr The complete chloroplast genome of Zanthoxylum piasezkii Maxim. (Rutaceae) and its phylogenetic analysis
title_full_unstemmed The complete chloroplast genome of Zanthoxylum piasezkii Maxim. (Rutaceae) and its phylogenetic analysis
title_short The complete chloroplast genome of Zanthoxylum piasezkii Maxim. (Rutaceae) and its phylogenetic analysis
title_sort complete chloroplast genome of zanthoxylum piasezkii maxim. (rutaceae) and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872585/
https://www.ncbi.nlm.nih.gov/pubmed/33659657
http://dx.doi.org/10.1080/23802359.2020.1866458
work_keys_str_mv AT sunchong thecompletechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis
AT liuxia thecompletechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis
AT dongpeng thecompletechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis
AT kuangmi thecompletechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis
AT chenzexiong thecompletechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis
AT sunchong completechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis
AT liuxia completechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis
AT dongpeng completechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis
AT kuangmi completechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis
AT chenzexiong completechloroplastgenomeofzanthoxylumpiasezkiimaximrutaceaeanditsphylogeneticanalysis

Ejemplares similares