Two complete chloroplast genomes of an endangered orchid species, Pelatantheria scolopendrifolia (Orchidaceae), in Korea

We determined the complete chloroplast genome sequence of two individuals of Pelatantheria scolopendrifolia, an endangered orchid species in Korea. The total chloroplast genome size of Mokpo (MG752972) and Naju (MG752973) population was 146,971 bp and 146,848 bp, respectively. The chloroplast genome...

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Autores principales: Yun, Seon A., Son, Hyun-Deok, Im, Hyoung-Tak, Kim, Seung-Chul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872586/
https://www.ncbi.nlm.nih.gov/pubmed/33659643
http://dx.doi.org/10.1080/23802359.2018.1437815
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author Yun, Seon A.
Son, Hyun-Deok
Im, Hyoung-Tak
Kim, Seung-Chul
author_facet Yun, Seon A.
Son, Hyun-Deok
Im, Hyoung-Tak
Kim, Seung-Chul
author_sort Yun, Seon A.
collection PubMed
description We determined the complete chloroplast genome sequence of two individuals of Pelatantheria scolopendrifolia, an endangered orchid species in Korea. The total chloroplast genome size of Mokpo (MG752972) and Naju (MG752973) population was 146,971 bp and 146,848 bp, respectively. The chloroplast genome contained 106 genes, including 72 protein-coding genes, 30 tRNA genes, and four rRNA genes. Variation in gene contents and structures was not found between two individuals. We found truncated or deleted ndh genes in P. scolopendrifolia. Phylogenetic analysis, based on the whole chloroplast genome sequences of 25 species of Orchidaceae, showed that P. scolopendrifolia was most closely related to Gastrochilus fuscopunctatus.
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spelling pubmed-78725862021-03-02 Two complete chloroplast genomes of an endangered orchid species, Pelatantheria scolopendrifolia (Orchidaceae), in Korea Yun, Seon A. Son, Hyun-Deok Im, Hyoung-Tak Kim, Seung-Chul Mitochondrial DNA B Resour Mitogenome Announcement We determined the complete chloroplast genome sequence of two individuals of Pelatantheria scolopendrifolia, an endangered orchid species in Korea. The total chloroplast genome size of Mokpo (MG752972) and Naju (MG752973) population was 146,971 bp and 146,848 bp, respectively. The chloroplast genome contained 106 genes, including 72 protein-coding genes, 30 tRNA genes, and four rRNA genes. Variation in gene contents and structures was not found between two individuals. We found truncated or deleted ndh genes in P. scolopendrifolia. Phylogenetic analysis, based on the whole chloroplast genome sequences of 25 species of Orchidaceae, showed that P. scolopendrifolia was most closely related to Gastrochilus fuscopunctatus. Taylor & Francis 2018-02-12 /pmc/articles/PMC7872586/ /pubmed/33659643 http://dx.doi.org/10.1080/23802359.2018.1437815 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Yun, Seon A.
Son, Hyun-Deok
Im, Hyoung-Tak
Kim, Seung-Chul
Two complete chloroplast genomes of an endangered orchid species, Pelatantheria scolopendrifolia (Orchidaceae), in Korea
title Two complete chloroplast genomes of an endangered orchid species, Pelatantheria scolopendrifolia (Orchidaceae), in Korea
title_full Two complete chloroplast genomes of an endangered orchid species, Pelatantheria scolopendrifolia (Orchidaceae), in Korea
title_fullStr Two complete chloroplast genomes of an endangered orchid species, Pelatantheria scolopendrifolia (Orchidaceae), in Korea
title_full_unstemmed Two complete chloroplast genomes of an endangered orchid species, Pelatantheria scolopendrifolia (Orchidaceae), in Korea
title_short Two complete chloroplast genomes of an endangered orchid species, Pelatantheria scolopendrifolia (Orchidaceae), in Korea
title_sort two complete chloroplast genomes of an endangered orchid species, pelatantheria scolopendrifolia (orchidaceae), in korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7872586/
https://www.ncbi.nlm.nih.gov/pubmed/33659643
http://dx.doi.org/10.1080/23802359.2018.1437815
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