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Identification of potential salivary biomarker panels for oral squamous cell carcinoma

Oral squamous cell carcinoma (OSCC) is one of the most prevalent cancers worldwide with the maximum number of incidences and deaths reported from India. One of the major causes of poor survival rate associated with OSCC has been attributed to late presentation due to non-availability of a biomarker....

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Autores principales: Jain, Anu, Kotimoole, Chinmaya Narayana, Ghoshal, Sushmita, Bakshi, Jaimanti, Chatterjee, Aditi, Prasad, Thottethodi Subrahmanya Keshava, Pal, Arnab
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7873065/
https://www.ncbi.nlm.nih.gov/pubmed/33564003
http://dx.doi.org/10.1038/s41598-021-82635-0
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author Jain, Anu
Kotimoole, Chinmaya Narayana
Ghoshal, Sushmita
Bakshi, Jaimanti
Chatterjee, Aditi
Prasad, Thottethodi Subrahmanya Keshava
Pal, Arnab
author_facet Jain, Anu
Kotimoole, Chinmaya Narayana
Ghoshal, Sushmita
Bakshi, Jaimanti
Chatterjee, Aditi
Prasad, Thottethodi Subrahmanya Keshava
Pal, Arnab
author_sort Jain, Anu
collection PubMed
description Oral squamous cell carcinoma (OSCC) is one of the most prevalent cancers worldwide with the maximum number of incidences and deaths reported from India. One of the major causes of poor survival rate associated with OSCC has been attributed to late presentation due to non-availability of a biomarker. Identification of early diagnostic biomarker will help in reducing the disease morbidity and mortality. We validated 12 salivary proteins using targeted proteomics, identified initially by relative quantification of salivary proteins on LC–MS, in OSCC patients and controls. Salivary AHSG (p = 0.0041**) and KRT6C (p = 0.002**) were upregulated in OSCC cases and AZGP1 (p ≤ 0.0001***), KLK1 (p = 0.006**) and BPIFB2 (p = 0.0061**) were downregulated. Regression modelling resulted in a significant risk prediction model (p < 0.0001***) consisting of AZGP1, AHSG and KRT6C for which ROC curve had AUC, sensitivity and specificity of 82.4%, 78% and 73.5% respectively for all OSCC cases and 87.9%, 87.5% and 73.5% respectively for late stage (T3/T4) OSCC. AZGP1, AHSG, KRT6C and BPIFB2 together resulted in ROC curve (p < 0.0001***) with AUC, sensitivity and specificity of 94%, 100% and 77.6% respectively for N0 cases while KRT6C and AZGP1 for N+ cases with ROC curve (p < 0.0001***) having AUC sensitivity and specificity of 76.8%, 73% and 69.4%. Our data aids in the identification of biomarker panels for the diagnosis of OSCC cases with a differential diagnosis between early and late-stage cases.
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spelling pubmed-78730652021-02-10 Identification of potential salivary biomarker panels for oral squamous cell carcinoma Jain, Anu Kotimoole, Chinmaya Narayana Ghoshal, Sushmita Bakshi, Jaimanti Chatterjee, Aditi Prasad, Thottethodi Subrahmanya Keshava Pal, Arnab Sci Rep Article Oral squamous cell carcinoma (OSCC) is one of the most prevalent cancers worldwide with the maximum number of incidences and deaths reported from India. One of the major causes of poor survival rate associated with OSCC has been attributed to late presentation due to non-availability of a biomarker. Identification of early diagnostic biomarker will help in reducing the disease morbidity and mortality. We validated 12 salivary proteins using targeted proteomics, identified initially by relative quantification of salivary proteins on LC–MS, in OSCC patients and controls. Salivary AHSG (p = 0.0041**) and KRT6C (p = 0.002**) were upregulated in OSCC cases and AZGP1 (p ≤ 0.0001***), KLK1 (p = 0.006**) and BPIFB2 (p = 0.0061**) were downregulated. Regression modelling resulted in a significant risk prediction model (p < 0.0001***) consisting of AZGP1, AHSG and KRT6C for which ROC curve had AUC, sensitivity and specificity of 82.4%, 78% and 73.5% respectively for all OSCC cases and 87.9%, 87.5% and 73.5% respectively for late stage (T3/T4) OSCC. AZGP1, AHSG, KRT6C and BPIFB2 together resulted in ROC curve (p < 0.0001***) with AUC, sensitivity and specificity of 94%, 100% and 77.6% respectively for N0 cases while KRT6C and AZGP1 for N+ cases with ROC curve (p < 0.0001***) having AUC sensitivity and specificity of 76.8%, 73% and 69.4%. Our data aids in the identification of biomarker panels for the diagnosis of OSCC cases with a differential diagnosis between early and late-stage cases. Nature Publishing Group UK 2021-02-09 /pmc/articles/PMC7873065/ /pubmed/33564003 http://dx.doi.org/10.1038/s41598-021-82635-0 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Jain, Anu
Kotimoole, Chinmaya Narayana
Ghoshal, Sushmita
Bakshi, Jaimanti
Chatterjee, Aditi
Prasad, Thottethodi Subrahmanya Keshava
Pal, Arnab
Identification of potential salivary biomarker panels for oral squamous cell carcinoma
title Identification of potential salivary biomarker panels for oral squamous cell carcinoma
title_full Identification of potential salivary biomarker panels for oral squamous cell carcinoma
title_fullStr Identification of potential salivary biomarker panels for oral squamous cell carcinoma
title_full_unstemmed Identification of potential salivary biomarker panels for oral squamous cell carcinoma
title_short Identification of potential salivary biomarker panels for oral squamous cell carcinoma
title_sort identification of potential salivary biomarker panels for oral squamous cell carcinoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7873065/
https://www.ncbi.nlm.nih.gov/pubmed/33564003
http://dx.doi.org/10.1038/s41598-021-82635-0
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