Cargando…

A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction

Seizure prediction may improve the quality of life of patients suffering from drug-resistant epilepsy, which accounts for about 30% of the total epileptic patients. The pre-ictal period determination, characterized by a transitional stage between normal brain activity and seizure, is a critical step...

Descripción completa

Detalles Bibliográficos
Autores principales: Pinto, Mauro. F., Leal, Adriana, Lopes, Fábio, Dourado, António, Martins, Pedro, Teixeira, César A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7873127/
https://www.ncbi.nlm.nih.gov/pubmed/33564050
http://dx.doi.org/10.1038/s41598-021-82828-7
_version_ 1783649330032279552
author Pinto, Mauro. F.
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César A.
author_facet Pinto, Mauro. F.
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César A.
author_sort Pinto, Mauro. F.
collection PubMed
description Seizure prediction may improve the quality of life of patients suffering from drug-resistant epilepsy, which accounts for about 30% of the total epileptic patients. The pre-ictal period determination, characterized by a transitional stage between normal brain activity and seizure, is a critical step. Past approaches failed to attain real-world applicability due to lack of generalization capacity. More recently, deep learning techniques may outperform traditional classifiers and handle time dependencies. However, despite the existing efforts for providing interpretable insights, clinicians may not be willing to make high-stake decisions based on them. Furthermore, a disadvantageous aspect of the more usual seizure prediction pipeline is its modularity and significant independence between stages. An alternative could be the construction of a search algorithm that, while considering pipeline stages’ synergy, fine-tunes the selection of a reduced set of features that are widely used in the literature and computationally efficient. With extracranial recordings from 19 patients suffering from temporal-lobe seizures, we developed a patient-specific evolutionary optimization strategy, aiming to generate the optimal set of features for seizure prediction with a logistic regression classifier, which was tested prospectively in a total of 49 seizures and 710 h of continuous recording and performed above chance for 32% of patients, using a surrogate predictor. These results demonstrate the hypothesis of pre-ictal period identification without the loss of interpretability, which may help understanding brain dynamics leading to seizures and improve prediction algorithms.
format Online
Article
Text
id pubmed-7873127
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-78731272021-02-10 A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction Pinto, Mauro. F. Leal, Adriana Lopes, Fábio Dourado, António Martins, Pedro Teixeira, César A. Sci Rep Article Seizure prediction may improve the quality of life of patients suffering from drug-resistant epilepsy, which accounts for about 30% of the total epileptic patients. The pre-ictal period determination, characterized by a transitional stage between normal brain activity and seizure, is a critical step. Past approaches failed to attain real-world applicability due to lack of generalization capacity. More recently, deep learning techniques may outperform traditional classifiers and handle time dependencies. However, despite the existing efforts for providing interpretable insights, clinicians may not be willing to make high-stake decisions based on them. Furthermore, a disadvantageous aspect of the more usual seizure prediction pipeline is its modularity and significant independence between stages. An alternative could be the construction of a search algorithm that, while considering pipeline stages’ synergy, fine-tunes the selection of a reduced set of features that are widely used in the literature and computationally efficient. With extracranial recordings from 19 patients suffering from temporal-lobe seizures, we developed a patient-specific evolutionary optimization strategy, aiming to generate the optimal set of features for seizure prediction with a logistic regression classifier, which was tested prospectively in a total of 49 seizures and 710 h of continuous recording and performed above chance for 32% of patients, using a surrogate predictor. These results demonstrate the hypothesis of pre-ictal period identification without the loss of interpretability, which may help understanding brain dynamics leading to seizures and improve prediction algorithms. Nature Publishing Group UK 2021-02-09 /pmc/articles/PMC7873127/ /pubmed/33564050 http://dx.doi.org/10.1038/s41598-021-82828-7 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Pinto, Mauro. F.
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César A.
A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title_full A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title_fullStr A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title_full_unstemmed A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title_short A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title_sort personalized and evolutionary algorithm for interpretable eeg epilepsy seizure prediction
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7873127/
https://www.ncbi.nlm.nih.gov/pubmed/33564050
http://dx.doi.org/10.1038/s41598-021-82828-7
work_keys_str_mv AT pintomaurof apersonalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT lealadriana apersonalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT lopesfabio apersonalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT douradoantonio apersonalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT martinspedro apersonalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT teixeiracesara apersonalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT pintomaurof personalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT lealadriana personalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT lopesfabio personalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT douradoantonio personalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT martinspedro personalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction
AT teixeiracesara personalizedandevolutionaryalgorithmforinterpretableeegepilepsyseizureprediction