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Machine learning prediction models for prognosis of critically ill patients after open-heart surgery
We aimed to build up multiple machine learning models to predict 30-days mortality, and 3 complications including septic shock, thrombocytopenia, and liver dysfunction after open-heart surgery. Patients who underwent coronary artery bypass surgery, aortic valve replacement, or other heart-related su...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7873187/ https://www.ncbi.nlm.nih.gov/pubmed/33564090 http://dx.doi.org/10.1038/s41598-021-83020-7 |
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author | Zhong, Zhihua Yuan, Xin Liu, Shizhen Yang, Yuer Liu, Fanna |
author_facet | Zhong, Zhihua Yuan, Xin Liu, Shizhen Yang, Yuer Liu, Fanna |
author_sort | Zhong, Zhihua |
collection | PubMed |
description | We aimed to build up multiple machine learning models to predict 30-days mortality, and 3 complications including septic shock, thrombocytopenia, and liver dysfunction after open-heart surgery. Patients who underwent coronary artery bypass surgery, aortic valve replacement, or other heart-related surgeries between 2001 and 2012 were extracted from MIMIC-III databases. Extreme gradient boosting, random forest, artificial neural network, and logistic regression were employed to build models by utilizing fivefold cross-validation and grid search. Receiver operating characteristic curve, area under curve (AUC), decision curve analysis, test accuracy, F1 score, precision, and recall were applied to access the performance. Among 6844 patients enrolled in this study, 215 patients (3.1%) died within 30 days after surgery, part of patients appeared liver dysfunction (248; 3.6%), septic shock (32; 0.5%), and thrombocytopenia (202; 2.9%). XGBoost, selected to be our final model, achieved the best performance with highest AUC and F1 score. AUC and F1 score of XGBoost for 4 outcomes: 0.88 and 0.58 for 30-days mortality, 0.98 and 0.70 for septic shock, 0.88 and 0.55 for thrombocytopenia, 0.89 and 0.40 for liver dysfunction. We developed a promising model, presented as software, to realize monitoring for patients in ICU and to improve prognosis. |
format | Online Article Text |
id | pubmed-7873187 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-78731872021-02-11 Machine learning prediction models for prognosis of critically ill patients after open-heart surgery Zhong, Zhihua Yuan, Xin Liu, Shizhen Yang, Yuer Liu, Fanna Sci Rep Article We aimed to build up multiple machine learning models to predict 30-days mortality, and 3 complications including septic shock, thrombocytopenia, and liver dysfunction after open-heart surgery. Patients who underwent coronary artery bypass surgery, aortic valve replacement, or other heart-related surgeries between 2001 and 2012 were extracted from MIMIC-III databases. Extreme gradient boosting, random forest, artificial neural network, and logistic regression were employed to build models by utilizing fivefold cross-validation and grid search. Receiver operating characteristic curve, area under curve (AUC), decision curve analysis, test accuracy, F1 score, precision, and recall were applied to access the performance. Among 6844 patients enrolled in this study, 215 patients (3.1%) died within 30 days after surgery, part of patients appeared liver dysfunction (248; 3.6%), septic shock (32; 0.5%), and thrombocytopenia (202; 2.9%). XGBoost, selected to be our final model, achieved the best performance with highest AUC and F1 score. AUC and F1 score of XGBoost for 4 outcomes: 0.88 and 0.58 for 30-days mortality, 0.98 and 0.70 for septic shock, 0.88 and 0.55 for thrombocytopenia, 0.89 and 0.40 for liver dysfunction. We developed a promising model, presented as software, to realize monitoring for patients in ICU and to improve prognosis. Nature Publishing Group UK 2021-02-09 /pmc/articles/PMC7873187/ /pubmed/33564090 http://dx.doi.org/10.1038/s41598-021-83020-7 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Zhong, Zhihua Yuan, Xin Liu, Shizhen Yang, Yuer Liu, Fanna Machine learning prediction models for prognosis of critically ill patients after open-heart surgery |
title | Machine learning prediction models for prognosis of critically ill patients after open-heart surgery |
title_full | Machine learning prediction models for prognosis of critically ill patients after open-heart surgery |
title_fullStr | Machine learning prediction models for prognosis of critically ill patients after open-heart surgery |
title_full_unstemmed | Machine learning prediction models for prognosis of critically ill patients after open-heart surgery |
title_short | Machine learning prediction models for prognosis of critically ill patients after open-heart surgery |
title_sort | machine learning prediction models for prognosis of critically ill patients after open-heart surgery |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7873187/ https://www.ncbi.nlm.nih.gov/pubmed/33564090 http://dx.doi.org/10.1038/s41598-021-83020-7 |
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