The phylogenomic position of the smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) inferred from the mitochondrial genome

In this study, the complete mitogenome of the Smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) was firstly determined. It was 16,729 bp, consisting of 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes and 1 putative control region with typical order to that of most othe...

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Autores principales: Chen, Hao, Chen, Xiao, Gu, Xichun, Wan, Huantong, Chen, Xi, Ai, Weiming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7875202/
https://www.ncbi.nlm.nih.gov/pubmed/34395874
http://dx.doi.org/10.1080/23802359.2016.1172274
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author Chen, Hao
Chen, Xiao
Gu, Xichun
Wan, Huantong
Chen, Xi
Ai, Weiming
author_facet Chen, Hao
Chen, Xiao
Gu, Xichun
Wan, Huantong
Chen, Xi
Ai, Weiming
author_sort Chen, Hao
collection PubMed
description In this study, the complete mitogenome of the Smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) was firstly determined. It was 16,729 bp, consisting of 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes and 1 putative control region with typical order to that of most other vertebrates. Its nucleotide base composition is 31.3% A, 23.0% C, 14.3% G and 31.5% T. Two start codons (GTG and ATG) and two stop codons (TAG and TAA/T) were used in the protein-coding genes. The phylogenetic results showed that E. pusillus was clustered to Squaliolus aliae (Dalatiidae) and suggested that Dalatiidae was polyphyletic.
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spelling pubmed-78752022021-08-14 The phylogenomic position of the smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) inferred from the mitochondrial genome Chen, Hao Chen, Xiao Gu, Xichun Wan, Huantong Chen, Xi Ai, Weiming Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitogenome of the Smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) was firstly determined. It was 16,729 bp, consisting of 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes and 1 putative control region with typical order to that of most other vertebrates. Its nucleotide base composition is 31.3% A, 23.0% C, 14.3% G and 31.5% T. Two start codons (GTG and ATG) and two stop codons (TAG and TAA/T) were used in the protein-coding genes. The phylogenetic results showed that E. pusillus was clustered to Squaliolus aliae (Dalatiidae) and suggested that Dalatiidae was polyphyletic. Taylor & Francis 2016-04-19 /pmc/articles/PMC7875202/ /pubmed/34395874 http://dx.doi.org/10.1080/23802359.2016.1172274 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Chen, Hao
Chen, Xiao
Gu, Xichun
Wan, Huantong
Chen, Xi
Ai, Weiming
The phylogenomic position of the smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) inferred from the mitochondrial genome
title The phylogenomic position of the smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) inferred from the mitochondrial genome
title_full The phylogenomic position of the smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) inferred from the mitochondrial genome
title_fullStr The phylogenomic position of the smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) inferred from the mitochondrial genome
title_full_unstemmed The phylogenomic position of the smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) inferred from the mitochondrial genome
title_short The phylogenomic position of the smooth lanternshark Etmopterus pusillus (Squaliformes: Etmopteridae) inferred from the mitochondrial genome
title_sort phylogenomic position of the smooth lanternshark etmopterus pusillus (squaliformes: etmopteridae) inferred from the mitochondrial genome
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7875202/
https://www.ncbi.nlm.nih.gov/pubmed/34395874
http://dx.doi.org/10.1080/23802359.2016.1172274
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