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Unraveling ChR2-driven stochastic Ca(2+) dynamics in astrocytes: A call for new interventional paradigms
Optogenetic targeting of astrocytes provides a robust experimental model to differentially induce Ca(2+) signals in astrocytes in vivo. However, a systematic study quantifying the response of optogenetically modified astrocytes to light is yet to be performed. Here, we propose a novel stochastic mod...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7875401/ https://www.ncbi.nlm.nih.gov/pubmed/33566841 http://dx.doi.org/10.1371/journal.pcbi.1008648 |
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author | Moshkforoush, Arash Balachandar, Lakshmini Moncion, Carolina Montejo, Karla A. Riera, Jorge |
author_facet | Moshkforoush, Arash Balachandar, Lakshmini Moncion, Carolina Montejo, Karla A. Riera, Jorge |
author_sort | Moshkforoush, Arash |
collection | PubMed |
description | Optogenetic targeting of astrocytes provides a robust experimental model to differentially induce Ca(2+) signals in astrocytes in vivo. However, a systematic study quantifying the response of optogenetically modified astrocytes to light is yet to be performed. Here, we propose a novel stochastic model of Ca(2+) dynamics in astrocytes that incorporates a light sensitive component—channelrhodopsin 2 (ChR2). Utilizing this model, we investigated the effect of different light stimulation paradigms on cells expressing select variants of ChR2 (wild type, ChETA, and ChRET/TC). Results predict that depending on paradigm specification, astrocytes might undergo drastic changes in their basal Ca(2+) level and spiking probability. Furthermore, we performed a global sensitivity analysis to assess the effect of variation in parameters pertinent to the shape of the ChR2 photocurrent on astrocytic Ca(2+) dynamics. Results suggest that directing variants towards the first open state of the ChR2 photocycle (o(1)) enhances spiking activity in astrocytes during optical stimulation. Evaluation of the effect of Ca(2+) buffering and coupling coefficient in a network of ChR2-expressing astrocytes demonstrated basal level elevations in the stimulated region and propagation of calcium activity to unstimulated cells. Buffering reduced the diffusion range of Ca(2+) within the network, thereby limiting propagation and influencing the activity of astrocytes. Collectively, the framework presented in this study provides valuable information for the selection of light stimulation paradigms that elicit desired astrocytic activity using existing ChR2 constructs, as well as aids in the engineering of future application-oriented optogenetic variants. |
format | Online Article Text |
id | pubmed-7875401 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-78754012021-02-19 Unraveling ChR2-driven stochastic Ca(2+) dynamics in astrocytes: A call for new interventional paradigms Moshkforoush, Arash Balachandar, Lakshmini Moncion, Carolina Montejo, Karla A. Riera, Jorge PLoS Comput Biol Research Article Optogenetic targeting of astrocytes provides a robust experimental model to differentially induce Ca(2+) signals in astrocytes in vivo. However, a systematic study quantifying the response of optogenetically modified astrocytes to light is yet to be performed. Here, we propose a novel stochastic model of Ca(2+) dynamics in astrocytes that incorporates a light sensitive component—channelrhodopsin 2 (ChR2). Utilizing this model, we investigated the effect of different light stimulation paradigms on cells expressing select variants of ChR2 (wild type, ChETA, and ChRET/TC). Results predict that depending on paradigm specification, astrocytes might undergo drastic changes in their basal Ca(2+) level and spiking probability. Furthermore, we performed a global sensitivity analysis to assess the effect of variation in parameters pertinent to the shape of the ChR2 photocurrent on astrocytic Ca(2+) dynamics. Results suggest that directing variants towards the first open state of the ChR2 photocycle (o(1)) enhances spiking activity in astrocytes during optical stimulation. Evaluation of the effect of Ca(2+) buffering and coupling coefficient in a network of ChR2-expressing astrocytes demonstrated basal level elevations in the stimulated region and propagation of calcium activity to unstimulated cells. Buffering reduced the diffusion range of Ca(2+) within the network, thereby limiting propagation and influencing the activity of astrocytes. Collectively, the framework presented in this study provides valuable information for the selection of light stimulation paradigms that elicit desired astrocytic activity using existing ChR2 constructs, as well as aids in the engineering of future application-oriented optogenetic variants. Public Library of Science 2021-02-10 /pmc/articles/PMC7875401/ /pubmed/33566841 http://dx.doi.org/10.1371/journal.pcbi.1008648 Text en © 2021 Moshkforoush et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Moshkforoush, Arash Balachandar, Lakshmini Moncion, Carolina Montejo, Karla A. Riera, Jorge Unraveling ChR2-driven stochastic Ca(2+) dynamics in astrocytes: A call for new interventional paradigms |
title | Unraveling ChR2-driven stochastic Ca(2+) dynamics in astrocytes: A call for new interventional paradigms |
title_full | Unraveling ChR2-driven stochastic Ca(2+) dynamics in astrocytes: A call for new interventional paradigms |
title_fullStr | Unraveling ChR2-driven stochastic Ca(2+) dynamics in astrocytes: A call for new interventional paradigms |
title_full_unstemmed | Unraveling ChR2-driven stochastic Ca(2+) dynamics in astrocytes: A call for new interventional paradigms |
title_short | Unraveling ChR2-driven stochastic Ca(2+) dynamics in astrocytes: A call for new interventional paradigms |
title_sort | unraveling chr2-driven stochastic ca(2+) dynamics in astrocytes: a call for new interventional paradigms |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7875401/ https://www.ncbi.nlm.nih.gov/pubmed/33566841 http://dx.doi.org/10.1371/journal.pcbi.1008648 |
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