Cargando…
Accelerated Failure Time Survival Model to Analyze Morris Water Maze Latency Data
Traumatic brain injury (TBI) induces cognitive deficits clinically and in animal models. Learning and memory testing is critical when evaluating potential therapeutic strategies and treatments to manage the effects of TBI. We evaluated three data analysis methods for the Morris water maze (MWM), a l...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Mary Ann Liebert, Inc., publishers
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7875609/ https://www.ncbi.nlm.nih.gov/pubmed/32829672 http://dx.doi.org/10.1089/neu.2020.7089 |
_version_ | 1783649794093219840 |
---|---|
author | Andersen, Clark R. Wolf, Jordan Jennings, Kristofer Prough, Donald S. Hawkins, Bridget E. |
author_facet | Andersen, Clark R. Wolf, Jordan Jennings, Kristofer Prough, Donald S. Hawkins, Bridget E. |
author_sort | Andersen, Clark R. |
collection | PubMed |
description | Traumatic brain injury (TBI) induces cognitive deficits clinically and in animal models. Learning and memory testing is critical when evaluating potential therapeutic strategies and treatments to manage the effects of TBI. We evaluated three data analysis methods for the Morris water maze (MWM), a learning and memory assessment widely used in the neurotrauma field, to determine which statistical tool is optimal for MWM data. Hidden platform spatial MWM data aggregated from three separate experiments from the same laboratory were analyzed using 1) a logistic regression model, 2) an analysis of variance (ANOVA) model, and 3) an accelerated failure time (AFT) time-to-event model. The logistic regression model showed no significant evidence of differences between treatments among any swims over all days of the study, p > 0.11. Although the ANOVA model found significant evidence of differences between sham and TBI groups on three out of four swims on the third day, results are potentially biased due to the failure of this model to account for censoring. The time-to-event AFT model showed significant differences between sham and TBI over all swims on the third day, p < 0.045, taking censoring into account. We suggest AFT models should be the preferred analytical methodology for latency to platform associated with MWM studies. |
format | Online Article Text |
id | pubmed-7875609 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Mary Ann Liebert, Inc., publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-78756092021-02-11 Accelerated Failure Time Survival Model to Analyze Morris Water Maze Latency Data Andersen, Clark R. Wolf, Jordan Jennings, Kristofer Prough, Donald S. Hawkins, Bridget E. J Neurotrauma Original Articles Traumatic brain injury (TBI) induces cognitive deficits clinically and in animal models. Learning and memory testing is critical when evaluating potential therapeutic strategies and treatments to manage the effects of TBI. We evaluated three data analysis methods for the Morris water maze (MWM), a learning and memory assessment widely used in the neurotrauma field, to determine which statistical tool is optimal for MWM data. Hidden platform spatial MWM data aggregated from three separate experiments from the same laboratory were analyzed using 1) a logistic regression model, 2) an analysis of variance (ANOVA) model, and 3) an accelerated failure time (AFT) time-to-event model. The logistic regression model showed no significant evidence of differences between treatments among any swims over all days of the study, p > 0.11. Although the ANOVA model found significant evidence of differences between sham and TBI groups on three out of four swims on the third day, results are potentially biased due to the failure of this model to account for censoring. The time-to-event AFT model showed significant differences between sham and TBI over all swims on the third day, p < 0.045, taking censoring into account. We suggest AFT models should be the preferred analytical methodology for latency to platform associated with MWM studies. Mary Ann Liebert, Inc., publishers 2021-02-15 2021-01-29 /pmc/articles/PMC7875609/ /pubmed/32829672 http://dx.doi.org/10.1089/neu.2020.7089 Text en © Clark R. Andersen et al., 2021; Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons Attribution Noncommercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Original Articles Andersen, Clark R. Wolf, Jordan Jennings, Kristofer Prough, Donald S. Hawkins, Bridget E. Accelerated Failure Time Survival Model to Analyze Morris Water Maze Latency Data |
title | Accelerated Failure Time Survival Model to Analyze Morris Water Maze Latency Data |
title_full | Accelerated Failure Time Survival Model to Analyze Morris Water Maze Latency Data |
title_fullStr | Accelerated Failure Time Survival Model to Analyze Morris Water Maze Latency Data |
title_full_unstemmed | Accelerated Failure Time Survival Model to Analyze Morris Water Maze Latency Data |
title_short | Accelerated Failure Time Survival Model to Analyze Morris Water Maze Latency Data |
title_sort | accelerated failure time survival model to analyze morris water maze latency data |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7875609/ https://www.ncbi.nlm.nih.gov/pubmed/32829672 http://dx.doi.org/10.1089/neu.2020.7089 |
work_keys_str_mv | AT andersenclarkr acceleratedfailuretimesurvivalmodeltoanalyzemorriswatermazelatencydata AT wolfjordan acceleratedfailuretimesurvivalmodeltoanalyzemorriswatermazelatencydata AT jenningskristofer acceleratedfailuretimesurvivalmodeltoanalyzemorriswatermazelatencydata AT proughdonalds acceleratedfailuretimesurvivalmodeltoanalyzemorriswatermazelatencydata AT hawkinsbridgete acceleratedfailuretimesurvivalmodeltoanalyzemorriswatermazelatencydata |