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Risk mapping for COVID-19 outbreaks in Australia using mobility data

COVID-19 is highly transmissible and containing outbreaks requires a rapid and effective response. Because infection may be spread by people who are pre-symptomatic or asymptomatic, substantial undetected transmission is likely to occur before clinical cases are diagnosed. Thus, when outbreaks occur...

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Autores principales: Zachreson, Cameron, Mitchell, Lewis, Lydeamore, Michael J., Rebuli, Nicolas, Tomko, Martin, Geard, Nicholas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7879754/
https://www.ncbi.nlm.nih.gov/pubmed/33404371
http://dx.doi.org/10.1098/rsif.2020.0657
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author Zachreson, Cameron
Mitchell, Lewis
Lydeamore, Michael J.
Rebuli, Nicolas
Tomko, Martin
Geard, Nicholas
author_facet Zachreson, Cameron
Mitchell, Lewis
Lydeamore, Michael J.
Rebuli, Nicolas
Tomko, Martin
Geard, Nicholas
author_sort Zachreson, Cameron
collection PubMed
description COVID-19 is highly transmissible and containing outbreaks requires a rapid and effective response. Because infection may be spread by people who are pre-symptomatic or asymptomatic, substantial undetected transmission is likely to occur before clinical cases are diagnosed. Thus, when outbreaks occur there is a need to anticipate which populations and locations are at heightened risk of exposure. In this work, we evaluate the utility of aggregate human mobility data for estimating the geographical distribution of transmission risk. We present a simple procedure for producing spatial transmission risk assessments from near-real-time population mobility data. We validate our estimates against three well-documented COVID-19 outbreaks in Australia. Two of these were well-defined transmission clusters and one was a community transmission scenario. Our results indicate that mobility data can be a good predictor of geographical patterns of exposure risk from transmission centres, particularly in outbreaks involving workplaces or other environments associated with habitual travel patterns. For community transmission scenarios, our results demonstrate that mobility data add the most value to risk predictions when case counts are low and spatially clustered. Our method could assist health systems in the allocation of testing resources, and potentially guide the implementation of geographically targeted restrictions on movement and social interaction.
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spelling pubmed-78797542021-02-12 Risk mapping for COVID-19 outbreaks in Australia using mobility data Zachreson, Cameron Mitchell, Lewis Lydeamore, Michael J. Rebuli, Nicolas Tomko, Martin Geard, Nicholas J R Soc Interface Life Sciences–Physics interface COVID-19 is highly transmissible and containing outbreaks requires a rapid and effective response. Because infection may be spread by people who are pre-symptomatic or asymptomatic, substantial undetected transmission is likely to occur before clinical cases are diagnosed. Thus, when outbreaks occur there is a need to anticipate which populations and locations are at heightened risk of exposure. In this work, we evaluate the utility of aggregate human mobility data for estimating the geographical distribution of transmission risk. We present a simple procedure for producing spatial transmission risk assessments from near-real-time population mobility data. We validate our estimates against three well-documented COVID-19 outbreaks in Australia. Two of these were well-defined transmission clusters and one was a community transmission scenario. Our results indicate that mobility data can be a good predictor of geographical patterns of exposure risk from transmission centres, particularly in outbreaks involving workplaces or other environments associated with habitual travel patterns. For community transmission scenarios, our results demonstrate that mobility data add the most value to risk predictions when case counts are low and spatially clustered. Our method could assist health systems in the allocation of testing resources, and potentially guide the implementation of geographically targeted restrictions on movement and social interaction. The Royal Society 2021-01 2021-01-06 /pmc/articles/PMC7879754/ /pubmed/33404371 http://dx.doi.org/10.1098/rsif.2020.0657 Text en © 2021 The Authors. http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Life Sciences–Physics interface
Zachreson, Cameron
Mitchell, Lewis
Lydeamore, Michael J.
Rebuli, Nicolas
Tomko, Martin
Geard, Nicholas
Risk mapping for COVID-19 outbreaks in Australia using mobility data
title Risk mapping for COVID-19 outbreaks in Australia using mobility data
title_full Risk mapping for COVID-19 outbreaks in Australia using mobility data
title_fullStr Risk mapping for COVID-19 outbreaks in Australia using mobility data
title_full_unstemmed Risk mapping for COVID-19 outbreaks in Australia using mobility data
title_short Risk mapping for COVID-19 outbreaks in Australia using mobility data
title_sort risk mapping for covid-19 outbreaks in australia using mobility data
topic Life Sciences–Physics interface
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7879754/
https://www.ncbi.nlm.nih.gov/pubmed/33404371
http://dx.doi.org/10.1098/rsif.2020.0657
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