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Identification of RNA-binding protein SNRPA1 for prognosis in prostate cancer

Prostate cancer is one of the deadliest cancers in men. RNA-binding proteins play a critical role in human cancers; however, whether they have a significant effect on the prognosis of prostate cancer has yet to be elucidated. In the present study, we performed a comprehensive analysis of RNA sequenc...

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Autores principales: Yuan, Penghui, Ling, Le, Gao, Xintao, Sun, Taotao, Miao, Jianping, Yuan, Xianglin, Liu, Jihong, Wang, Zhihua, Liu, Bo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7880319/
https://www.ncbi.nlm.nih.gov/pubmed/33460399
http://dx.doi.org/10.18632/aging.202387
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author Yuan, Penghui
Ling, Le
Gao, Xintao
Sun, Taotao
Miao, Jianping
Yuan, Xianglin
Liu, Jihong
Wang, Zhihua
Liu, Bo
author_facet Yuan, Penghui
Ling, Le
Gao, Xintao
Sun, Taotao
Miao, Jianping
Yuan, Xianglin
Liu, Jihong
Wang, Zhihua
Liu, Bo
author_sort Yuan, Penghui
collection PubMed
description Prostate cancer is one of the deadliest cancers in men. RNA-binding proteins play a critical role in human cancers; however, whether they have a significant effect on the prognosis of prostate cancer has yet to be elucidated. In the present study, we performed a comprehensive analysis of RNA sequencing and clinical data from the Cancer Genome Atlas dataset and obtained differentially expressed RNA-binding proteins between prostate cancer and benign tissues. We constructed a protein-protein interaction network and Cox regression analyses were conducted to identify prognostic hub RNA-binding proteins. SNRPA1 was associated with the highest risk of poor prognosis and was therefore selected for further analysis. SNRPA1 expression was positively correlated with Gleason score and pathological TNM stage in prostate cancer patients. Furthermore, the expression profile of SNRPA1 was validated using the Oncomine, Human Protein Atlas, and Cancer Cell Line Encyclopedia databases. Meanwhile, the prognostic profile of SNRPA1 was successfully verified in GSE70769. Additionally, the results of molecular experiments revealed the proliferative role of SNRPA1 in prostate cancer cells. In summary, our findings evidenced a relationship between RNA-binding proteins and prostate cancer and indicated the prognostic significance of SNRPA1 in prostate cancer.
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spelling pubmed-78803192021-02-22 Identification of RNA-binding protein SNRPA1 for prognosis in prostate cancer Yuan, Penghui Ling, Le Gao, Xintao Sun, Taotao Miao, Jianping Yuan, Xianglin Liu, Jihong Wang, Zhihua Liu, Bo Aging (Albany NY) Research Paper Prostate cancer is one of the deadliest cancers in men. RNA-binding proteins play a critical role in human cancers; however, whether they have a significant effect on the prognosis of prostate cancer has yet to be elucidated. In the present study, we performed a comprehensive analysis of RNA sequencing and clinical data from the Cancer Genome Atlas dataset and obtained differentially expressed RNA-binding proteins between prostate cancer and benign tissues. We constructed a protein-protein interaction network and Cox regression analyses were conducted to identify prognostic hub RNA-binding proteins. SNRPA1 was associated with the highest risk of poor prognosis and was therefore selected for further analysis. SNRPA1 expression was positively correlated with Gleason score and pathological TNM stage in prostate cancer patients. Furthermore, the expression profile of SNRPA1 was validated using the Oncomine, Human Protein Atlas, and Cancer Cell Line Encyclopedia databases. Meanwhile, the prognostic profile of SNRPA1 was successfully verified in GSE70769. Additionally, the results of molecular experiments revealed the proliferative role of SNRPA1 in prostate cancer cells. In summary, our findings evidenced a relationship between RNA-binding proteins and prostate cancer and indicated the prognostic significance of SNRPA1 in prostate cancer. Impact Journals 2021-01-15 /pmc/articles/PMC7880319/ /pubmed/33460399 http://dx.doi.org/10.18632/aging.202387 Text en Copyright: © 2021 Yuan et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Yuan, Penghui
Ling, Le
Gao, Xintao
Sun, Taotao
Miao, Jianping
Yuan, Xianglin
Liu, Jihong
Wang, Zhihua
Liu, Bo
Identification of RNA-binding protein SNRPA1 for prognosis in prostate cancer
title Identification of RNA-binding protein SNRPA1 for prognosis in prostate cancer
title_full Identification of RNA-binding protein SNRPA1 for prognosis in prostate cancer
title_fullStr Identification of RNA-binding protein SNRPA1 for prognosis in prostate cancer
title_full_unstemmed Identification of RNA-binding protein SNRPA1 for prognosis in prostate cancer
title_short Identification of RNA-binding protein SNRPA1 for prognosis in prostate cancer
title_sort identification of rna-binding protein snrpa1 for prognosis in prostate cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7880319/
https://www.ncbi.nlm.nih.gov/pubmed/33460399
http://dx.doi.org/10.18632/aging.202387
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