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Evaluating epidemic forecasts in an interval format

For practical reasons, many forecasts of case, hospitalization, and death counts in the context of the current Coronavirus Disease 2019 (COVID-19) pandemic are issued in the form of central predictive intervals at various levels. This is also the case for the forecasts collected in the COVID-19 Fore...

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Detalles Bibliográficos
Autores principales: Bracher, Johannes, Ray, Evan L., Gneiting, Tilmann, Reich, Nicholas G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7880475/
https://www.ncbi.nlm.nih.gov/pubmed/33577550
http://dx.doi.org/10.1371/journal.pcbi.1008618
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author Bracher, Johannes
Ray, Evan L.
Gneiting, Tilmann
Reich, Nicholas G.
author_facet Bracher, Johannes
Ray, Evan L.
Gneiting, Tilmann
Reich, Nicholas G.
author_sort Bracher, Johannes
collection PubMed
description For practical reasons, many forecasts of case, hospitalization, and death counts in the context of the current Coronavirus Disease 2019 (COVID-19) pandemic are issued in the form of central predictive intervals at various levels. This is also the case for the forecasts collected in the COVID-19 Forecast Hub (https://covid19forecasthub.org/). Forecast evaluation metrics like the logarithmic score, which has been applied in several infectious disease forecasting challenges, are then not available as they require full predictive distributions. This article provides an overview of how established methods for the evaluation of quantile and interval forecasts can be applied to epidemic forecasts in this format. Specifically, we discuss the computation and interpretation of the weighted interval score, which is a proper score that approximates the continuous ranked probability score. It can be interpreted as a generalization of the absolute error to probabilistic forecasts and allows for a decomposition into a measure of sharpness and penalties for over- and underprediction.
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spelling pubmed-78804752021-02-19 Evaluating epidemic forecasts in an interval format Bracher, Johannes Ray, Evan L. Gneiting, Tilmann Reich, Nicholas G. PLoS Comput Biol Perspective For practical reasons, many forecasts of case, hospitalization, and death counts in the context of the current Coronavirus Disease 2019 (COVID-19) pandemic are issued in the form of central predictive intervals at various levels. This is also the case for the forecasts collected in the COVID-19 Forecast Hub (https://covid19forecasthub.org/). Forecast evaluation metrics like the logarithmic score, which has been applied in several infectious disease forecasting challenges, are then not available as they require full predictive distributions. This article provides an overview of how established methods for the evaluation of quantile and interval forecasts can be applied to epidemic forecasts in this format. Specifically, we discuss the computation and interpretation of the weighted interval score, which is a proper score that approximates the continuous ranked probability score. It can be interpreted as a generalization of the absolute error to probabilistic forecasts and allows for a decomposition into a measure of sharpness and penalties for over- and underprediction. Public Library of Science 2021-02-12 /pmc/articles/PMC7880475/ /pubmed/33577550 http://dx.doi.org/10.1371/journal.pcbi.1008618 Text en © 2021 Bracher et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Perspective
Bracher, Johannes
Ray, Evan L.
Gneiting, Tilmann
Reich, Nicholas G.
Evaluating epidemic forecasts in an interval format
title Evaluating epidemic forecasts in an interval format
title_full Evaluating epidemic forecasts in an interval format
title_fullStr Evaluating epidemic forecasts in an interval format
title_full_unstemmed Evaluating epidemic forecasts in an interval format
title_short Evaluating epidemic forecasts in an interval format
title_sort evaluating epidemic forecasts in an interval format
topic Perspective
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7880475/
https://www.ncbi.nlm.nih.gov/pubmed/33577550
http://dx.doi.org/10.1371/journal.pcbi.1008618
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