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Expression of BAG1 is associated with prognosis in kidney renal clear cell carcinoma based on bioinformatics
BACKGROUND: BCL2 associated Athano-Gene 1 (BAG1) has been described to be involved in the development and progression of cancer. But the role of BAG1 in kidney renal clear cell carcinoma (KIRC) has remained largely unknown. METHODS: We performed bioinformatic analysis of data from TCGA and GEO datas...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7881605/ https://www.ncbi.nlm.nih.gov/pubmed/33581726 http://dx.doi.org/10.1186/s12885-021-07874-w |
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author | Wu, Hongrong Liu, Minjing He, Yuejun Meng, Guozhao Guo, Wanbei Guo, Qiong |
author_facet | Wu, Hongrong Liu, Minjing He, Yuejun Meng, Guozhao Guo, Wanbei Guo, Qiong |
author_sort | Wu, Hongrong |
collection | PubMed |
description | BACKGROUND: BCL2 associated Athano-Gene 1 (BAG1) has been described to be involved in the development and progression of cancer. But the role of BAG1 in kidney renal clear cell carcinoma (KIRC) has remained largely unknown. METHODS: We performed bioinformatic analysis of data from TCGA and GEO dataset. The role of BAG1 in KIRC was explored by Logistic and Cox regression model. The molecular mechanisms of BAG1 was revealed by GSEA. RESULTS: The current study found that the KIRC tumor samples have a low level of BAG1 mRNA expression compared to the matched normal tissues based on TCGA data and GEO databases. Low expression of BAG1 in KIRC was significantly associated with Sex, clinical pathological stage, tumor-node-metastasis (TNM) stage, hemoglobin levels, cancer status and history of neoadjuvant treatment. Kaplan-Meier survival analysis indicated that KIRC patients with BAG1 high expression have a longer survival time than those with BAG1 low expression (p < 0.000). Cox regression analysis showed that BAG1 remained independently associated with overall survival, with a hazard ratio (HR) of 1.75(CI:1.05–2.90; p = 0.029). GSEA indicated that the signaling pathways including fatty acid metabolism and oxidative phosphorylation were differentially enriched in high BAG1 expression phenotype. CONCLUSIONS: These findings suggested that BAG1 expression may act as a potential favorable prognostic marker and challenging therapeutic target. |
format | Online Article Text |
id | pubmed-7881605 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-78816052021-02-17 Expression of BAG1 is associated with prognosis in kidney renal clear cell carcinoma based on bioinformatics Wu, Hongrong Liu, Minjing He, Yuejun Meng, Guozhao Guo, Wanbei Guo, Qiong BMC Cancer Research Article BACKGROUND: BCL2 associated Athano-Gene 1 (BAG1) has been described to be involved in the development and progression of cancer. But the role of BAG1 in kidney renal clear cell carcinoma (KIRC) has remained largely unknown. METHODS: We performed bioinformatic analysis of data from TCGA and GEO dataset. The role of BAG1 in KIRC was explored by Logistic and Cox regression model. The molecular mechanisms of BAG1 was revealed by GSEA. RESULTS: The current study found that the KIRC tumor samples have a low level of BAG1 mRNA expression compared to the matched normal tissues based on TCGA data and GEO databases. Low expression of BAG1 in KIRC was significantly associated with Sex, clinical pathological stage, tumor-node-metastasis (TNM) stage, hemoglobin levels, cancer status and history of neoadjuvant treatment. Kaplan-Meier survival analysis indicated that KIRC patients with BAG1 high expression have a longer survival time than those with BAG1 low expression (p < 0.000). Cox regression analysis showed that BAG1 remained independently associated with overall survival, with a hazard ratio (HR) of 1.75(CI:1.05–2.90; p = 0.029). GSEA indicated that the signaling pathways including fatty acid metabolism and oxidative phosphorylation were differentially enriched in high BAG1 expression phenotype. CONCLUSIONS: These findings suggested that BAG1 expression may act as a potential favorable prognostic marker and challenging therapeutic target. BioMed Central 2021-02-13 /pmc/articles/PMC7881605/ /pubmed/33581726 http://dx.doi.org/10.1186/s12885-021-07874-w Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Wu, Hongrong Liu, Minjing He, Yuejun Meng, Guozhao Guo, Wanbei Guo, Qiong Expression of BAG1 is associated with prognosis in kidney renal clear cell carcinoma based on bioinformatics |
title | Expression of BAG1 is associated with prognosis in kidney renal clear cell carcinoma based on bioinformatics |
title_full | Expression of BAG1 is associated with prognosis in kidney renal clear cell carcinoma based on bioinformatics |
title_fullStr | Expression of BAG1 is associated with prognosis in kidney renal clear cell carcinoma based on bioinformatics |
title_full_unstemmed | Expression of BAG1 is associated with prognosis in kidney renal clear cell carcinoma based on bioinformatics |
title_short | Expression of BAG1 is associated with prognosis in kidney renal clear cell carcinoma based on bioinformatics |
title_sort | expression of bag1 is associated with prognosis in kidney renal clear cell carcinoma based on bioinformatics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7881605/ https://www.ncbi.nlm.nih.gov/pubmed/33581726 http://dx.doi.org/10.1186/s12885-021-07874-w |
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