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NOise reduction with DIstribution Corrected (NORDIC) PCA in dMRI with complex-valued parameter-free locally low-rank processing
Diffusion-weighted magnetic resonance imaging (dMRI) has found great utility for a wide range of neuroscientific and clinical applications. However, high-resolution dMRI, which is required for improved delineation of fine brain structures and connectomics, is hampered by its low signal-to-noise rati...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7881933/ https://www.ncbi.nlm.nih.gov/pubmed/33186723 http://dx.doi.org/10.1016/j.neuroimage.2020.117539 |
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author | Moeller, Steen Pisharady, Pramod Kumar Ramanna, Sudhir Lenglet, Christophe Wu, Xiaoping Dowdle, Logan Yacoub, Essa Uğurbil, Kamil Akçakaya, Mehmet |
author_facet | Moeller, Steen Pisharady, Pramod Kumar Ramanna, Sudhir Lenglet, Christophe Wu, Xiaoping Dowdle, Logan Yacoub, Essa Uğurbil, Kamil Akçakaya, Mehmet |
author_sort | Moeller, Steen |
collection | PubMed |
description | Diffusion-weighted magnetic resonance imaging (dMRI) has found great utility for a wide range of neuroscientific and clinical applications. However, high-resolution dMRI, which is required for improved delineation of fine brain structures and connectomics, is hampered by its low signal-to-noise ratio (SNR). Since dMRI relies on the acquisition of multiple different diffusion weighted images of the same anatomy, it is well-suited for denoising methods that utilize correlations across the image series to improve the apparent SNR and the subsequent data analysis. In this work, we introduce and quantitatively evaluate a comprehensive framework, NOise Reduction with DIstribution Corrected (NORDIC) PCA method for processing dMRI. NORDIC uses low-rank modeling of g-factor-corrected complex dMRI reconstruction and non-asymptotic random matrix distributions to remove signal components which cannot be distinguished from thermal noise. The utility of the proposed framework for denoising dMRI is demonstrated on both simulations and experimental data obtained at 3 Tesla with different resolutions using human connectome project style acquisitions. The proposed framework leads to substantially enhanced quantitative performance for estimating diffusion tractography related measures and for resolving crossing fibers as compared to a conventional/state-of-the-art dMRI denoising method. |
format | Online Article Text |
id | pubmed-7881933 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
record_format | MEDLINE/PubMed |
spelling | pubmed-78819332021-02-13 NOise reduction with DIstribution Corrected (NORDIC) PCA in dMRI with complex-valued parameter-free locally low-rank processing Moeller, Steen Pisharady, Pramod Kumar Ramanna, Sudhir Lenglet, Christophe Wu, Xiaoping Dowdle, Logan Yacoub, Essa Uğurbil, Kamil Akçakaya, Mehmet Neuroimage Article Diffusion-weighted magnetic resonance imaging (dMRI) has found great utility for a wide range of neuroscientific and clinical applications. However, high-resolution dMRI, which is required for improved delineation of fine brain structures and connectomics, is hampered by its low signal-to-noise ratio (SNR). Since dMRI relies on the acquisition of multiple different diffusion weighted images of the same anatomy, it is well-suited for denoising methods that utilize correlations across the image series to improve the apparent SNR and the subsequent data analysis. In this work, we introduce and quantitatively evaluate a comprehensive framework, NOise Reduction with DIstribution Corrected (NORDIC) PCA method for processing dMRI. NORDIC uses low-rank modeling of g-factor-corrected complex dMRI reconstruction and non-asymptotic random matrix distributions to remove signal components which cannot be distinguished from thermal noise. The utility of the proposed framework for denoising dMRI is demonstrated on both simulations and experimental data obtained at 3 Tesla with different resolutions using human connectome project style acquisitions. The proposed framework leads to substantially enhanced quantitative performance for estimating diffusion tractography related measures and for resolving crossing fibers as compared to a conventional/state-of-the-art dMRI denoising method. 2020-11-10 2021-02-01 /pmc/articles/PMC7881933/ /pubmed/33186723 http://dx.doi.org/10.1016/j.neuroimage.2020.117539 Text en This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/) |
spellingShingle | Article Moeller, Steen Pisharady, Pramod Kumar Ramanna, Sudhir Lenglet, Christophe Wu, Xiaoping Dowdle, Logan Yacoub, Essa Uğurbil, Kamil Akçakaya, Mehmet NOise reduction with DIstribution Corrected (NORDIC) PCA in dMRI with complex-valued parameter-free locally low-rank processing |
title | NOise reduction with DIstribution Corrected (NORDIC) PCA in dMRI with complex-valued parameter-free locally low-rank processing |
title_full | NOise reduction with DIstribution Corrected (NORDIC) PCA in dMRI with complex-valued parameter-free locally low-rank processing |
title_fullStr | NOise reduction with DIstribution Corrected (NORDIC) PCA in dMRI with complex-valued parameter-free locally low-rank processing |
title_full_unstemmed | NOise reduction with DIstribution Corrected (NORDIC) PCA in dMRI with complex-valued parameter-free locally low-rank processing |
title_short | NOise reduction with DIstribution Corrected (NORDIC) PCA in dMRI with complex-valued parameter-free locally low-rank processing |
title_sort | noise reduction with distribution corrected (nordic) pca in dmri with complex-valued parameter-free locally low-rank processing |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7881933/ https://www.ncbi.nlm.nih.gov/pubmed/33186723 http://dx.doi.org/10.1016/j.neuroimage.2020.117539 |
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