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On‐site genetic analysis for species identification using lab‐on‐a‐chip
This paper presents a microfluidic device capable of performing genetic analysis on dung samples to identify White Rhinoceros (Ceratotherium simum). The development of a microfluidic device, which can be used in the field, offers a portable and cost‐effective solution for DNA analysis and species id...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7882957/ https://www.ncbi.nlm.nih.gov/pubmed/33613987 http://dx.doi.org/10.1002/ece3.7053 |
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author | Wimbles, Ryan Melling, Louise M. Cain, Bradley Davies, Naomi Doherty, Jason Johnson, Bridget Shaw, Kirsty J. |
author_facet | Wimbles, Ryan Melling, Louise M. Cain, Bradley Davies, Naomi Doherty, Jason Johnson, Bridget Shaw, Kirsty J. |
author_sort | Wimbles, Ryan |
collection | PubMed |
description | This paper presents a microfluidic device capable of performing genetic analysis on dung samples to identify White Rhinoceros (Ceratotherium simum). The development of a microfluidic device, which can be used in the field, offers a portable and cost‐effective solution for DNA analysis and species identification to aid conservation efforts. Optimization of the DNA extraction processes produced equivalent yields compared to conventional kit‐based methods within just 5 minutes. The use of a color‐changing loop‐mediated isothermal amplification reaction for simultaneous detection of the cytochrome B sequence of C. simum enabled positive results to be obtained within as little as 30 minutes. Field testing was performed at Knowsley Safari to demonstrate real‐world applicability of the microfluidic device for testing of biological samples. |
format | Online Article Text |
id | pubmed-7882957 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-78829572021-02-19 On‐site genetic analysis for species identification using lab‐on‐a‐chip Wimbles, Ryan Melling, Louise M. Cain, Bradley Davies, Naomi Doherty, Jason Johnson, Bridget Shaw, Kirsty J. Ecol Evol Original Research This paper presents a microfluidic device capable of performing genetic analysis on dung samples to identify White Rhinoceros (Ceratotherium simum). The development of a microfluidic device, which can be used in the field, offers a portable and cost‐effective solution for DNA analysis and species identification to aid conservation efforts. Optimization of the DNA extraction processes produced equivalent yields compared to conventional kit‐based methods within just 5 minutes. The use of a color‐changing loop‐mediated isothermal amplification reaction for simultaneous detection of the cytochrome B sequence of C. simum enabled positive results to be obtained within as little as 30 minutes. Field testing was performed at Knowsley Safari to demonstrate real‐world applicability of the microfluidic device for testing of biological samples. John Wiley and Sons Inc. 2021-01-29 /pmc/articles/PMC7882957/ /pubmed/33613987 http://dx.doi.org/10.1002/ece3.7053 Text en © 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Wimbles, Ryan Melling, Louise M. Cain, Bradley Davies, Naomi Doherty, Jason Johnson, Bridget Shaw, Kirsty J. On‐site genetic analysis for species identification using lab‐on‐a‐chip |
title | On‐site genetic analysis for species identification using lab‐on‐a‐chip |
title_full | On‐site genetic analysis for species identification using lab‐on‐a‐chip |
title_fullStr | On‐site genetic analysis for species identification using lab‐on‐a‐chip |
title_full_unstemmed | On‐site genetic analysis for species identification using lab‐on‐a‐chip |
title_short | On‐site genetic analysis for species identification using lab‐on‐a‐chip |
title_sort | on‐site genetic analysis for species identification using lab‐on‐a‐chip |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7882957/ https://www.ncbi.nlm.nih.gov/pubmed/33613987 http://dx.doi.org/10.1002/ece3.7053 |
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