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Transferred-Rotational-Echo Double Resonance

[Image: see text] Internuclear distance determination is the foundation for NMR-based structure calculation. However, high-precision distance measurement is a laborious process requiring lengthy data acquisitions due to the large set of multidimensional spectra needed at different mixing times. This...

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Autores principales: Zhang, Xizhou Cecily, Forster, Marcel C., Nimerovsky, Evgeny, Movellan, Kumar Tekwani, Andreas, Loren B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7884007/
https://www.ncbi.nlm.nih.gov/pubmed/33464081
http://dx.doi.org/10.1021/acs.jpca.0c09033
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author Zhang, Xizhou Cecily
Forster, Marcel C.
Nimerovsky, Evgeny
Movellan, Kumar Tekwani
Andreas, Loren B.
author_facet Zhang, Xizhou Cecily
Forster, Marcel C.
Nimerovsky, Evgeny
Movellan, Kumar Tekwani
Andreas, Loren B.
author_sort Zhang, Xizhou Cecily
collection PubMed
description [Image: see text] Internuclear distance determination is the foundation for NMR-based structure calculation. However, high-precision distance measurement is a laborious process requiring lengthy data acquisitions due to the large set of multidimensional spectra needed at different mixing times. This prevents application to large or challenging molecular systems. Here, we present a new approach, transferred-rotational-echo double resonance (TREDOR), a heteronuclear transfer method in which we simultaneously detect both starting and transferred signals in a single spectrum. This co-acquisition is used to compensate for coherence decay, resulting in accurate and precise distance determination by a single parameter fit using a single spectrum recorded at an ideal mixing time. We showcase TREDOR with the microcrystalline SH3 protein using 3D spectra to resolve resonances. By combining the measured N–C and H–C distances, we calculate the structure of SH3, which converges to the correct fold, with a root-mean-square deviation of 2.1 Å compared to a reference X-ray structure. The TREDOR data used in the structure calculation were acquired in only 4 days on a 600 MHz instrument. This is achieved due to the more than 2-fold time saving afforded by co-acquisition of additional information and demonstrates TREDOR as a fast and straightforward method for determining structures via magic-angle spinning NMR.
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spelling pubmed-78840072021-02-16 Transferred-Rotational-Echo Double Resonance Zhang, Xizhou Cecily Forster, Marcel C. Nimerovsky, Evgeny Movellan, Kumar Tekwani Andreas, Loren B. J Phys Chem A [Image: see text] Internuclear distance determination is the foundation for NMR-based structure calculation. However, high-precision distance measurement is a laborious process requiring lengthy data acquisitions due to the large set of multidimensional spectra needed at different mixing times. This prevents application to large or challenging molecular systems. Here, we present a new approach, transferred-rotational-echo double resonance (TREDOR), a heteronuclear transfer method in which we simultaneously detect both starting and transferred signals in a single spectrum. This co-acquisition is used to compensate for coherence decay, resulting in accurate and precise distance determination by a single parameter fit using a single spectrum recorded at an ideal mixing time. We showcase TREDOR with the microcrystalline SH3 protein using 3D spectra to resolve resonances. By combining the measured N–C and H–C distances, we calculate the structure of SH3, which converges to the correct fold, with a root-mean-square deviation of 2.1 Å compared to a reference X-ray structure. The TREDOR data used in the structure calculation were acquired in only 4 days on a 600 MHz instrument. This is achieved due to the more than 2-fold time saving afforded by co-acquisition of additional information and demonstrates TREDOR as a fast and straightforward method for determining structures via magic-angle spinning NMR. American Chemical Society 2021-01-19 2021-01-28 /pmc/articles/PMC7884007/ /pubmed/33464081 http://dx.doi.org/10.1021/acs.jpca.0c09033 Text en © 2021 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
spellingShingle Zhang, Xizhou Cecily
Forster, Marcel C.
Nimerovsky, Evgeny
Movellan, Kumar Tekwani
Andreas, Loren B.
Transferred-Rotational-Echo Double Resonance
title Transferred-Rotational-Echo Double Resonance
title_full Transferred-Rotational-Echo Double Resonance
title_fullStr Transferred-Rotational-Echo Double Resonance
title_full_unstemmed Transferred-Rotational-Echo Double Resonance
title_short Transferred-Rotational-Echo Double Resonance
title_sort transferred-rotational-echo double resonance
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7884007/
https://www.ncbi.nlm.nih.gov/pubmed/33464081
http://dx.doi.org/10.1021/acs.jpca.0c09033
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