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Water and Life: The Medium is the Message

Water, the most abundant compound on the surface of the Earth and probably in the universe, is the medium of biology, but is much more than that. Water is the most frequent actor in the chemistry of metabolism. Our quantitation here reveals that water accounts for 99.4% of metabolites in Escherichia...

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Autores principales: Frenkel-Pinter, Moran, Rajaei, Vahab, Glass, Jennifer B., Hud, Nicholas V., Williams, Loren Dean
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7884305/
https://www.ncbi.nlm.nih.gov/pubmed/33427903
http://dx.doi.org/10.1007/s00239-020-09978-6
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author Frenkel-Pinter, Moran
Rajaei, Vahab
Glass, Jennifer B.
Hud, Nicholas V.
Williams, Loren Dean
author_facet Frenkel-Pinter, Moran
Rajaei, Vahab
Glass, Jennifer B.
Hud, Nicholas V.
Williams, Loren Dean
author_sort Frenkel-Pinter, Moran
collection PubMed
description Water, the most abundant compound on the surface of the Earth and probably in the universe, is the medium of biology, but is much more than that. Water is the most frequent actor in the chemistry of metabolism. Our quantitation here reveals that water accounts for 99.4% of metabolites in Escherichia coli by molar concentration. Between a third and a half of known biochemical reactions involve consumption or production of water. We calculated the chemical flux of water and observed that in the life of a cell, a given water molecule frequently and repeatedly serves as a reaction substrate, intermediate, cofactor, and product. Our results show that as an E. coli cell replicates in the presence of molecular oxygen, an average in vivo water molecule is chemically transformed or is mechanistically involved in catalysis ~ 3.7 times. We conclude that, for biological water, there is no distinction between medium and chemical participant. Chemical transformations of water provide a basis for understanding not only extant biochemistry, but the origins of life. Because the chemistry of water dominates metabolism and also drives biological synthesis and degradation, it seems likely that metabolism co-evolved with biopolymers, which helps to reconcile polymer-first versus metabolism-first theories for the origins of life. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00239-020-09978-6) contains supplementary material, which is available to authorized users.
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spelling pubmed-78843052021-02-25 Water and Life: The Medium is the Message Frenkel-Pinter, Moran Rajaei, Vahab Glass, Jennifer B. Hud, Nicholas V. Williams, Loren Dean J Mol Evol Original Article Water, the most abundant compound on the surface of the Earth and probably in the universe, is the medium of biology, but is much more than that. Water is the most frequent actor in the chemistry of metabolism. Our quantitation here reveals that water accounts for 99.4% of metabolites in Escherichia coli by molar concentration. Between a third and a half of known biochemical reactions involve consumption or production of water. We calculated the chemical flux of water and observed that in the life of a cell, a given water molecule frequently and repeatedly serves as a reaction substrate, intermediate, cofactor, and product. Our results show that as an E. coli cell replicates in the presence of molecular oxygen, an average in vivo water molecule is chemically transformed or is mechanistically involved in catalysis ~ 3.7 times. We conclude that, for biological water, there is no distinction between medium and chemical participant. Chemical transformations of water provide a basis for understanding not only extant biochemistry, but the origins of life. Because the chemistry of water dominates metabolism and also drives biological synthesis and degradation, it seems likely that metabolism co-evolved with biopolymers, which helps to reconcile polymer-first versus metabolism-first theories for the origins of life. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00239-020-09978-6) contains supplementary material, which is available to authorized users. Springer US 2021-01-11 2021 /pmc/articles/PMC7884305/ /pubmed/33427903 http://dx.doi.org/10.1007/s00239-020-09978-6 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Original Article
Frenkel-Pinter, Moran
Rajaei, Vahab
Glass, Jennifer B.
Hud, Nicholas V.
Williams, Loren Dean
Water and Life: The Medium is the Message
title Water and Life: The Medium is the Message
title_full Water and Life: The Medium is the Message
title_fullStr Water and Life: The Medium is the Message
title_full_unstemmed Water and Life: The Medium is the Message
title_short Water and Life: The Medium is the Message
title_sort water and life: the medium is the message
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7884305/
https://www.ncbi.nlm.nih.gov/pubmed/33427903
http://dx.doi.org/10.1007/s00239-020-09978-6
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