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MQF and buffered MQF: quotient filters for efficient storage of k-mers with their counts and metadata
BACKGROUND: Specialized data structures are required for online algorithms to efficiently handle large sequencing datasets. The counting quotient filter (CQF), a compact hashtable, can efficiently store k-mers with a skewed distribution. RESULT: Here, we present the mixed-counters quotient filter (M...
| Autores principales: | , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
BioMed Central
2021
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7885209/ https://www.ncbi.nlm.nih.gov/pubmed/33593271 http://dx.doi.org/10.1186/s12859-021-03996-x |