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Calumenin contributes to epithelial-mesenchymal transition and predicts poor survival in glioma
BACKGROUND: Calumenin (CALU) has been reported to be associated with invasiveness and metastasis in some malignancies. However, in glioma, the role of CALU remains unclear. METHODS: Clinical and transcriptome data of 998 glioma patients, including 301 from CGGA and 697 from TCGA dataset, were includ...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
De Gruyter
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7885298/ https://www.ncbi.nlm.nih.gov/pubmed/33623713 http://dx.doi.org/10.1515/tnsci-2021-0004 |
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author | Yang, Ying Wang, Jin Xu, Shihai Shi, Fei Shan, Aijun |
author_facet | Yang, Ying Wang, Jin Xu, Shihai Shi, Fei Shan, Aijun |
author_sort | Yang, Ying |
collection | PubMed |
description | BACKGROUND: Calumenin (CALU) has been reported to be associated with invasiveness and metastasis in some malignancies. However, in glioma, the role of CALU remains unclear. METHODS: Clinical and transcriptome data of 998 glioma patients, including 301 from CGGA and 697 from TCGA dataset, were included. R language was used to perform statistical analyses. RESULTS: CALU expression was significantly upregulated in more malignant gliomas, including higher grade, IDH wildtype, mesenchymal, and classical subtype. Gene Ontology analysis revealed that CALU-correlated genes were mainly enriched in cell/biological adhesion, response to wounding, and extracellular matrix/structure organization, all of which were strongly correlated with the epithelial-mesenchymal transition (EMT) phenotype. GSEA further validated the profound involvement of CALU in EMT. Subsequent GSVA suggested that CALU was particularly correlated with three EMT signaling pathways, including TGFβ, PI3K/AKT, and hypoxia pathway. Furthermore, CALU played synergistically with EMT key markers, including N-cadherin, vimentin, snail, slug, and TWIST1. Survival and Cox regression analysis showed that higher CALU predicted worse survival, and the prognostic value was independent of WHO grade and age. CONCLUSIONS: CALU was correlated with more malignant phenotypes in glioma. Moreover, CALU seemed to serve as a pro-EMT molecular target and could contribute to predict prognosis independently in glioma. |
format | Online Article Text |
id | pubmed-7885298 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | De Gruyter |
record_format | MEDLINE/PubMed |
spelling | pubmed-78852982021-02-22 Calumenin contributes to epithelial-mesenchymal transition and predicts poor survival in glioma Yang, Ying Wang, Jin Xu, Shihai Shi, Fei Shan, Aijun Transl Neurosci Research Article BACKGROUND: Calumenin (CALU) has been reported to be associated with invasiveness and metastasis in some malignancies. However, in glioma, the role of CALU remains unclear. METHODS: Clinical and transcriptome data of 998 glioma patients, including 301 from CGGA and 697 from TCGA dataset, were included. R language was used to perform statistical analyses. RESULTS: CALU expression was significantly upregulated in more malignant gliomas, including higher grade, IDH wildtype, mesenchymal, and classical subtype. Gene Ontology analysis revealed that CALU-correlated genes were mainly enriched in cell/biological adhesion, response to wounding, and extracellular matrix/structure organization, all of which were strongly correlated with the epithelial-mesenchymal transition (EMT) phenotype. GSEA further validated the profound involvement of CALU in EMT. Subsequent GSVA suggested that CALU was particularly correlated with three EMT signaling pathways, including TGFβ, PI3K/AKT, and hypoxia pathway. Furthermore, CALU played synergistically with EMT key markers, including N-cadherin, vimentin, snail, slug, and TWIST1. Survival and Cox regression analysis showed that higher CALU predicted worse survival, and the prognostic value was independent of WHO grade and age. CONCLUSIONS: CALU was correlated with more malignant phenotypes in glioma. Moreover, CALU seemed to serve as a pro-EMT molecular target and could contribute to predict prognosis independently in glioma. De Gruyter 2021-02-03 /pmc/articles/PMC7885298/ /pubmed/33623713 http://dx.doi.org/10.1515/tnsci-2021-0004 Text en © 2021 Ying Yang et al., published by De Gruyter http://creativecommons.org/licenses/by/4.0 This work is licensed under the Creative Commons Attribution 4.0 International License. |
spellingShingle | Research Article Yang, Ying Wang, Jin Xu, Shihai Shi, Fei Shan, Aijun Calumenin contributes to epithelial-mesenchymal transition and predicts poor survival in glioma |
title | Calumenin contributes to epithelial-mesenchymal transition and predicts poor survival in glioma |
title_full | Calumenin contributes to epithelial-mesenchymal transition and predicts poor survival in glioma |
title_fullStr | Calumenin contributes to epithelial-mesenchymal transition and predicts poor survival in glioma |
title_full_unstemmed | Calumenin contributes to epithelial-mesenchymal transition and predicts poor survival in glioma |
title_short | Calumenin contributes to epithelial-mesenchymal transition and predicts poor survival in glioma |
title_sort | calumenin contributes to epithelial-mesenchymal transition and predicts poor survival in glioma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7885298/ https://www.ncbi.nlm.nih.gov/pubmed/33623713 http://dx.doi.org/10.1515/tnsci-2021-0004 |
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