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Reconstructing the Intrinsic Statistical Properties of Intermittent Locomotion Through Corrections for Boundary Effects
Locomotion characteristics are often recorded within bounded spaces, a constraint which introduces geometry-specific biases and potentially complicates the inference of behavioural features from empirical observations. We describe how statistical properties of an uncorrelated random walk, namely the...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7886738/ https://www.ncbi.nlm.nih.gov/pubmed/33594585 http://dx.doi.org/10.1007/s11538-020-00848-2 |
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author | Cocconi, Luca Kuhn-Régnier, Alexander Neuss, Malte Sendova-Franks, Ana B. Christensen, Kim |
author_facet | Cocconi, Luca Kuhn-Régnier, Alexander Neuss, Malte Sendova-Franks, Ana B. Christensen, Kim |
author_sort | Cocconi, Luca |
collection | PubMed |
description | Locomotion characteristics are often recorded within bounded spaces, a constraint which introduces geometry-specific biases and potentially complicates the inference of behavioural features from empirical observations. We describe how statistical properties of an uncorrelated random walk, namely the steady-state stopping location probability density and the empirical step probability density, are affected by enclosure in a bounded space. The random walk here is considered as a null model for an organism moving intermittently in such a space, that is, the points represent stopping locations and the step is the displacement between them. Closed-form expressions are derived for motion in one dimension and simple two-dimensional geometries, in addition to an implicit expression for arbitrary (convex) geometries. For the particular choice of no-go boundary conditions, we demonstrate that the empirical step distribution is related to the intrinsic step distribution, i.e. the one we would observe in unbounded space, via a multiplicative transformation dependent solely on the boundary geometry. This conclusion allows in practice for the compensation of boundary effects and the reconstruction of the intrinsic step distribution from empirical observations. |
format | Online Article Text |
id | pubmed-7886738 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-78867382021-03-03 Reconstructing the Intrinsic Statistical Properties of Intermittent Locomotion Through Corrections for Boundary Effects Cocconi, Luca Kuhn-Régnier, Alexander Neuss, Malte Sendova-Franks, Ana B. Christensen, Kim Bull Math Biol Original Article Locomotion characteristics are often recorded within bounded spaces, a constraint which introduces geometry-specific biases and potentially complicates the inference of behavioural features from empirical observations. We describe how statistical properties of an uncorrelated random walk, namely the steady-state stopping location probability density and the empirical step probability density, are affected by enclosure in a bounded space. The random walk here is considered as a null model for an organism moving intermittently in such a space, that is, the points represent stopping locations and the step is the displacement between them. Closed-form expressions are derived for motion in one dimension and simple two-dimensional geometries, in addition to an implicit expression for arbitrary (convex) geometries. For the particular choice of no-go boundary conditions, we demonstrate that the empirical step distribution is related to the intrinsic step distribution, i.e. the one we would observe in unbounded space, via a multiplicative transformation dependent solely on the boundary geometry. This conclusion allows in practice for the compensation of boundary effects and the reconstruction of the intrinsic step distribution from empirical observations. Springer US 2021-02-17 2021 /pmc/articles/PMC7886738/ /pubmed/33594585 http://dx.doi.org/10.1007/s11538-020-00848-2 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Original Article Cocconi, Luca Kuhn-Régnier, Alexander Neuss, Malte Sendova-Franks, Ana B. Christensen, Kim Reconstructing the Intrinsic Statistical Properties of Intermittent Locomotion Through Corrections for Boundary Effects |
title | Reconstructing the Intrinsic Statistical Properties of Intermittent Locomotion Through Corrections for Boundary Effects |
title_full | Reconstructing the Intrinsic Statistical Properties of Intermittent Locomotion Through Corrections for Boundary Effects |
title_fullStr | Reconstructing the Intrinsic Statistical Properties of Intermittent Locomotion Through Corrections for Boundary Effects |
title_full_unstemmed | Reconstructing the Intrinsic Statistical Properties of Intermittent Locomotion Through Corrections for Boundary Effects |
title_short | Reconstructing the Intrinsic Statistical Properties of Intermittent Locomotion Through Corrections for Boundary Effects |
title_sort | reconstructing the intrinsic statistical properties of intermittent locomotion through corrections for boundary effects |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7886738/ https://www.ncbi.nlm.nih.gov/pubmed/33594585 http://dx.doi.org/10.1007/s11538-020-00848-2 |
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