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Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples

INTRODUCTION: Toxoplasma-PCR is essential to diagnose ocular, cerebral, disseminated and congenital toxoplasmosis. This multicenter study evaluated the impact of sample storage duration at +4°C on PCR assay performances in order to propose guidelines for the storage of samples during shipment or/and...

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Autores principales: Brenier-Pinchart, Marie-Pierre, Varlet-Marie, Emmanuelle, Robert-Gangneux, Florence, Filisetti, Denis, Guitard, Juliette, Sterkers, Yvon, Yera, Hélène, Pelloux, Hervé, Bastien, Patrick
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7888589/
https://www.ncbi.nlm.nih.gov/pubmed/33596222
http://dx.doi.org/10.1371/journal.pone.0246802
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author Brenier-Pinchart, Marie-Pierre
Varlet-Marie, Emmanuelle
Robert-Gangneux, Florence
Filisetti, Denis
Guitard, Juliette
Sterkers, Yvon
Yera, Hélène
Pelloux, Hervé
Bastien, Patrick
author_facet Brenier-Pinchart, Marie-Pierre
Varlet-Marie, Emmanuelle
Robert-Gangneux, Florence
Filisetti, Denis
Guitard, Juliette
Sterkers, Yvon
Yera, Hélène
Pelloux, Hervé
Bastien, Patrick
author_sort Brenier-Pinchart, Marie-Pierre
collection PubMed
description INTRODUCTION: Toxoplasma-PCR is essential to diagnose ocular, cerebral, disseminated and congenital toxoplasmosis. This multicenter study evaluated the impact of sample storage duration at +4°C on PCR assay performances in order to propose guidelines for the storage of samples during shipment or/and before PCR. MATERIALS AND METHODS: Five matrices, amniotic (AF), cerebrospinal (CSF), and bronchoalveolar lavage fluids (BALF), whole blood (WB) and buffy coat (BC), were artificially spiked with different amounts of Toxoplasma gondii (20, 100, 500 tachyzoites per mL of sample) or with previously infected THP1 cells. DNA extractions were performed at day 0 and after 2, 4 and 7 days of storage at +4°C. Each extract was amplified at least twice by real-time PCR. RESULTS: A total of 252 spiked samples was studied. No increase of crossing point was observed and all samples were positive for AF, BALF, BC and infected THP1-spiked WB after up to 7 days at 4°C. For CSF spiked with 20 parasites/mL, only 50% of PCR reactions were positive at D7 (p<0.05). For WB spiked with type II parasites, all reactions remained positive at D7 but amplifications were significantly delayed from D2; and for WB spiked with RH strain, the proportion of positive reactions decreased at D7. CONCLUSION: The storage of clinical samples at +4°C is compatible with the molecular detection of T. gondii parasites. Provided that PCR assays are performed in duplicate, storage of samples is possible up to 7 days. However, from the fifth day onwards, and for samples susceptible to contain low parasitic loads, we recommend to perform the PCR in multiplicate.
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spelling pubmed-78885892021-02-23 Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples Brenier-Pinchart, Marie-Pierre Varlet-Marie, Emmanuelle Robert-Gangneux, Florence Filisetti, Denis Guitard, Juliette Sterkers, Yvon Yera, Hélène Pelloux, Hervé Bastien, Patrick PLoS One Research Article INTRODUCTION: Toxoplasma-PCR is essential to diagnose ocular, cerebral, disseminated and congenital toxoplasmosis. This multicenter study evaluated the impact of sample storage duration at +4°C on PCR assay performances in order to propose guidelines for the storage of samples during shipment or/and before PCR. MATERIALS AND METHODS: Five matrices, amniotic (AF), cerebrospinal (CSF), and bronchoalveolar lavage fluids (BALF), whole blood (WB) and buffy coat (BC), were artificially spiked with different amounts of Toxoplasma gondii (20, 100, 500 tachyzoites per mL of sample) or with previously infected THP1 cells. DNA extractions were performed at day 0 and after 2, 4 and 7 days of storage at +4°C. Each extract was amplified at least twice by real-time PCR. RESULTS: A total of 252 spiked samples was studied. No increase of crossing point was observed and all samples were positive for AF, BALF, BC and infected THP1-spiked WB after up to 7 days at 4°C. For CSF spiked with 20 parasites/mL, only 50% of PCR reactions were positive at D7 (p<0.05). For WB spiked with type II parasites, all reactions remained positive at D7 but amplifications were significantly delayed from D2; and for WB spiked with RH strain, the proportion of positive reactions decreased at D7. CONCLUSION: The storage of clinical samples at +4°C is compatible with the molecular detection of T. gondii parasites. Provided that PCR assays are performed in duplicate, storage of samples is possible up to 7 days. However, from the fifth day onwards, and for samples susceptible to contain low parasitic loads, we recommend to perform the PCR in multiplicate. Public Library of Science 2021-02-17 /pmc/articles/PMC7888589/ /pubmed/33596222 http://dx.doi.org/10.1371/journal.pone.0246802 Text en © 2021 Brenier-Pinchart et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Brenier-Pinchart, Marie-Pierre
Varlet-Marie, Emmanuelle
Robert-Gangneux, Florence
Filisetti, Denis
Guitard, Juliette
Sterkers, Yvon
Yera, Hélène
Pelloux, Hervé
Bastien, Patrick
Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples
title Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples
title_full Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples
title_fullStr Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples
title_full_unstemmed Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples
title_short Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples
title_sort impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7888589/
https://www.ncbi.nlm.nih.gov/pubmed/33596222
http://dx.doi.org/10.1371/journal.pone.0246802
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