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Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples
INTRODUCTION: Toxoplasma-PCR is essential to diagnose ocular, cerebral, disseminated and congenital toxoplasmosis. This multicenter study evaluated the impact of sample storage duration at +4°C on PCR assay performances in order to propose guidelines for the storage of samples during shipment or/and...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7888589/ https://www.ncbi.nlm.nih.gov/pubmed/33596222 http://dx.doi.org/10.1371/journal.pone.0246802 |
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author | Brenier-Pinchart, Marie-Pierre Varlet-Marie, Emmanuelle Robert-Gangneux, Florence Filisetti, Denis Guitard, Juliette Sterkers, Yvon Yera, Hélène Pelloux, Hervé Bastien, Patrick |
author_facet | Brenier-Pinchart, Marie-Pierre Varlet-Marie, Emmanuelle Robert-Gangneux, Florence Filisetti, Denis Guitard, Juliette Sterkers, Yvon Yera, Hélène Pelloux, Hervé Bastien, Patrick |
author_sort | Brenier-Pinchart, Marie-Pierre |
collection | PubMed |
description | INTRODUCTION: Toxoplasma-PCR is essential to diagnose ocular, cerebral, disseminated and congenital toxoplasmosis. This multicenter study evaluated the impact of sample storage duration at +4°C on PCR assay performances in order to propose guidelines for the storage of samples during shipment or/and before PCR. MATERIALS AND METHODS: Five matrices, amniotic (AF), cerebrospinal (CSF), and bronchoalveolar lavage fluids (BALF), whole blood (WB) and buffy coat (BC), were artificially spiked with different amounts of Toxoplasma gondii (20, 100, 500 tachyzoites per mL of sample) or with previously infected THP1 cells. DNA extractions were performed at day 0 and after 2, 4 and 7 days of storage at +4°C. Each extract was amplified at least twice by real-time PCR. RESULTS: A total of 252 spiked samples was studied. No increase of crossing point was observed and all samples were positive for AF, BALF, BC and infected THP1-spiked WB after up to 7 days at 4°C. For CSF spiked with 20 parasites/mL, only 50% of PCR reactions were positive at D7 (p<0.05). For WB spiked with type II parasites, all reactions remained positive at D7 but amplifications were significantly delayed from D2; and for WB spiked with RH strain, the proportion of positive reactions decreased at D7. CONCLUSION: The storage of clinical samples at +4°C is compatible with the molecular detection of T. gondii parasites. Provided that PCR assays are performed in duplicate, storage of samples is possible up to 7 days. However, from the fifth day onwards, and for samples susceptible to contain low parasitic loads, we recommend to perform the PCR in multiplicate. |
format | Online Article Text |
id | pubmed-7888589 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-78885892021-02-23 Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples Brenier-Pinchart, Marie-Pierre Varlet-Marie, Emmanuelle Robert-Gangneux, Florence Filisetti, Denis Guitard, Juliette Sterkers, Yvon Yera, Hélène Pelloux, Hervé Bastien, Patrick PLoS One Research Article INTRODUCTION: Toxoplasma-PCR is essential to diagnose ocular, cerebral, disseminated and congenital toxoplasmosis. This multicenter study evaluated the impact of sample storage duration at +4°C on PCR assay performances in order to propose guidelines for the storage of samples during shipment or/and before PCR. MATERIALS AND METHODS: Five matrices, amniotic (AF), cerebrospinal (CSF), and bronchoalveolar lavage fluids (BALF), whole blood (WB) and buffy coat (BC), were artificially spiked with different amounts of Toxoplasma gondii (20, 100, 500 tachyzoites per mL of sample) or with previously infected THP1 cells. DNA extractions were performed at day 0 and after 2, 4 and 7 days of storage at +4°C. Each extract was amplified at least twice by real-time PCR. RESULTS: A total of 252 spiked samples was studied. No increase of crossing point was observed and all samples were positive for AF, BALF, BC and infected THP1-spiked WB after up to 7 days at 4°C. For CSF spiked with 20 parasites/mL, only 50% of PCR reactions were positive at D7 (p<0.05). For WB spiked with type II parasites, all reactions remained positive at D7 but amplifications were significantly delayed from D2; and for WB spiked with RH strain, the proportion of positive reactions decreased at D7. CONCLUSION: The storage of clinical samples at +4°C is compatible with the molecular detection of T. gondii parasites. Provided that PCR assays are performed in duplicate, storage of samples is possible up to 7 days. However, from the fifth day onwards, and for samples susceptible to contain low parasitic loads, we recommend to perform the PCR in multiplicate. Public Library of Science 2021-02-17 /pmc/articles/PMC7888589/ /pubmed/33596222 http://dx.doi.org/10.1371/journal.pone.0246802 Text en © 2021 Brenier-Pinchart et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Brenier-Pinchart, Marie-Pierre Varlet-Marie, Emmanuelle Robert-Gangneux, Florence Filisetti, Denis Guitard, Juliette Sterkers, Yvon Yera, Hélène Pelloux, Hervé Bastien, Patrick Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples |
title | Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples |
title_full | Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples |
title_fullStr | Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples |
title_full_unstemmed | Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples |
title_short | Impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples |
title_sort | impact of pre-analytic step duration on molecular diagnosis of toxoplasmosis for five types of biological samples |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7888589/ https://www.ncbi.nlm.nih.gov/pubmed/33596222 http://dx.doi.org/10.1371/journal.pone.0246802 |
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