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Development of an interactive, agent-based local stochastic model of COVID-19 transmission and evaluation of mitigation strategies illustrated for the state of Massachusetts, USA

Since its discovery in the Hubei province of China, the global spread of the novel coronavirus SARS-CoV-2 has resulted in millions of COVID-19 cases and hundreds of thousands of deaths. The spread throughout Asia, Europe, and the Americas has presented one of the greatest infectious disease threats...

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Autores principales: Kirpich, Alexander, Koniukhovskii, Vladimir, Shvartc, Vladimir, Skums, Pavel, Weppelmann, Thomas A., Imyanitov, Evgeny, Semyonov, Semyon, Barsukov, Konstantin, Gankin, Yuriy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7888623/
https://www.ncbi.nlm.nih.gov/pubmed/33596247
http://dx.doi.org/10.1371/journal.pone.0247182
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author Kirpich, Alexander
Koniukhovskii, Vladimir
Shvartc, Vladimir
Skums, Pavel
Weppelmann, Thomas A.
Imyanitov, Evgeny
Semyonov, Semyon
Barsukov, Konstantin
Gankin, Yuriy
author_facet Kirpich, Alexander
Koniukhovskii, Vladimir
Shvartc, Vladimir
Skums, Pavel
Weppelmann, Thomas A.
Imyanitov, Evgeny
Semyonov, Semyon
Barsukov, Konstantin
Gankin, Yuriy
author_sort Kirpich, Alexander
collection PubMed
description Since its discovery in the Hubei province of China, the global spread of the novel coronavirus SARS-CoV-2 has resulted in millions of COVID-19 cases and hundreds of thousands of deaths. The spread throughout Asia, Europe, and the Americas has presented one of the greatest infectious disease threats in recent history and has tested the capacity of global health infrastructures. Since no effective vaccine is available, isolation techniques to prevent infection such as home quarantine and social distancing while in public have remained the cornerstone of public health interventions. While government and health officials were charged with implementing stay-at-home strategies, many of which had little guidance as to the consequences of how quickly to begin them. Moreover, as the local epidemic curves have been flattened, the same officials must wrestle with when to ease or cease such restrictions as to not impose economic turmoil. To evaluate the effects of quarantine strategies during the initial epidemic, an agent based modeling framework was created to take into account local spread based on geographic and population data with a corresponding interactive desktop and web-based application. Using the state of Massachusetts in the United States of America, we have illustrated the consequences of implementing quarantines at different time points after the initial seeding of the state with COVID-19 cases. Furthermore, we suggest that this application can be adapted to other states, small countries, or regions within a country to provide decision makers with critical information necessary to best protect human health.
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spelling pubmed-78886232021-02-23 Development of an interactive, agent-based local stochastic model of COVID-19 transmission and evaluation of mitigation strategies illustrated for the state of Massachusetts, USA Kirpich, Alexander Koniukhovskii, Vladimir Shvartc, Vladimir Skums, Pavel Weppelmann, Thomas A. Imyanitov, Evgeny Semyonov, Semyon Barsukov, Konstantin Gankin, Yuriy PLoS One Research Article Since its discovery in the Hubei province of China, the global spread of the novel coronavirus SARS-CoV-2 has resulted in millions of COVID-19 cases and hundreds of thousands of deaths. The spread throughout Asia, Europe, and the Americas has presented one of the greatest infectious disease threats in recent history and has tested the capacity of global health infrastructures. Since no effective vaccine is available, isolation techniques to prevent infection such as home quarantine and social distancing while in public have remained the cornerstone of public health interventions. While government and health officials were charged with implementing stay-at-home strategies, many of which had little guidance as to the consequences of how quickly to begin them. Moreover, as the local epidemic curves have been flattened, the same officials must wrestle with when to ease or cease such restrictions as to not impose economic turmoil. To evaluate the effects of quarantine strategies during the initial epidemic, an agent based modeling framework was created to take into account local spread based on geographic and population data with a corresponding interactive desktop and web-based application. Using the state of Massachusetts in the United States of America, we have illustrated the consequences of implementing quarantines at different time points after the initial seeding of the state with COVID-19 cases. Furthermore, we suggest that this application can be adapted to other states, small countries, or regions within a country to provide decision makers with critical information necessary to best protect human health. Public Library of Science 2021-02-17 /pmc/articles/PMC7888623/ /pubmed/33596247 http://dx.doi.org/10.1371/journal.pone.0247182 Text en © 2021 Kirpich et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kirpich, Alexander
Koniukhovskii, Vladimir
Shvartc, Vladimir
Skums, Pavel
Weppelmann, Thomas A.
Imyanitov, Evgeny
Semyonov, Semyon
Barsukov, Konstantin
Gankin, Yuriy
Development of an interactive, agent-based local stochastic model of COVID-19 transmission and evaluation of mitigation strategies illustrated for the state of Massachusetts, USA
title Development of an interactive, agent-based local stochastic model of COVID-19 transmission and evaluation of mitigation strategies illustrated for the state of Massachusetts, USA
title_full Development of an interactive, agent-based local stochastic model of COVID-19 transmission and evaluation of mitigation strategies illustrated for the state of Massachusetts, USA
title_fullStr Development of an interactive, agent-based local stochastic model of COVID-19 transmission and evaluation of mitigation strategies illustrated for the state of Massachusetts, USA
title_full_unstemmed Development of an interactive, agent-based local stochastic model of COVID-19 transmission and evaluation of mitigation strategies illustrated for the state of Massachusetts, USA
title_short Development of an interactive, agent-based local stochastic model of COVID-19 transmission and evaluation of mitigation strategies illustrated for the state of Massachusetts, USA
title_sort development of an interactive, agent-based local stochastic model of covid-19 transmission and evaluation of mitigation strategies illustrated for the state of massachusetts, usa
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7888623/
https://www.ncbi.nlm.nih.gov/pubmed/33596247
http://dx.doi.org/10.1371/journal.pone.0247182
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