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Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level

Beta-lactam- and in particular carbapenem-resistant Enterobacteriaceae represent a major public health threat. Despite strong variation of resistance across geographical settings, there is limited understanding of the underlying drivers. To assess these drivers, we developed a transmission model of...

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Autores principales: Kachalov, Viacheslav N., Nguyen, Huyen, Balakrishna, Suraj, Salazar-Vizcaya, Luisa, Sommerstein, Rami, Kuster, Stefan P., Hauser, Anthony, Abel zur Wiesch, Pia, Klein, Eili, Kouyos, Roger D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7888642/
https://www.ncbi.nlm.nih.gov/pubmed/33513129
http://dx.doi.org/10.1371/journal.pcbi.1008446
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author Kachalov, Viacheslav N.
Nguyen, Huyen
Balakrishna, Suraj
Salazar-Vizcaya, Luisa
Sommerstein, Rami
Kuster, Stefan P.
Hauser, Anthony
Abel zur Wiesch, Pia
Klein, Eili
Kouyos, Roger D.
author_facet Kachalov, Viacheslav N.
Nguyen, Huyen
Balakrishna, Suraj
Salazar-Vizcaya, Luisa
Sommerstein, Rami
Kuster, Stefan P.
Hauser, Anthony
Abel zur Wiesch, Pia
Klein, Eili
Kouyos, Roger D.
author_sort Kachalov, Viacheslav N.
collection PubMed
description Beta-lactam- and in particular carbapenem-resistant Enterobacteriaceae represent a major public health threat. Despite strong variation of resistance across geographical settings, there is limited understanding of the underlying drivers. To assess these drivers, we developed a transmission model of cephalosporin- and carbapenem-resistant Klebsiella pneumoniae. The model is parameterized using antibiotic consumption and demographic data from eleven European countries and fitted to the resistance rates for Klebsiella pneumoniae for these settings. The impact of potential drivers of resistance is then assessed in counterfactual analyses. Based on reported consumption data, the model could simultaneously fit the prevalence of extended-spectrum beta-lactamase-producing and carbapenem-resistant Klebsiella pneumoniae (ESBL and CRK) across eleven European countries over eleven years. The fit could explain the large between-country variability of resistance in terms of consumption patterns and fitted differences in hospital transmission rates. Based on this fit, a counterfactual analysis found that reducing nosocomial transmission and antibiotic consumption in the hospital had the strongest impact on ESBL and CRK prevalence. Antibiotic consumption in the community also affected ESBL prevalence but its relative impact was weaker than inpatient consumption. Finally, we used the model to estimate a moderate fitness cost of CRK and ESBL at the population level. This work highlights the disproportionate role of antibiotic consumption in the hospital and of nosocomial transmission for resistance in gram-negative bacteria at a European level. This indicates that infection control and antibiotic stewardship measures should play a major role in limiting resistance even at the national or regional level.
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spelling pubmed-78886422021-02-25 Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level Kachalov, Viacheslav N. Nguyen, Huyen Balakrishna, Suraj Salazar-Vizcaya, Luisa Sommerstein, Rami Kuster, Stefan P. Hauser, Anthony Abel zur Wiesch, Pia Klein, Eili Kouyos, Roger D. PLoS Comput Biol Research Article Beta-lactam- and in particular carbapenem-resistant Enterobacteriaceae represent a major public health threat. Despite strong variation of resistance across geographical settings, there is limited understanding of the underlying drivers. To assess these drivers, we developed a transmission model of cephalosporin- and carbapenem-resistant Klebsiella pneumoniae. The model is parameterized using antibiotic consumption and demographic data from eleven European countries and fitted to the resistance rates for Klebsiella pneumoniae for these settings. The impact of potential drivers of resistance is then assessed in counterfactual analyses. Based on reported consumption data, the model could simultaneously fit the prevalence of extended-spectrum beta-lactamase-producing and carbapenem-resistant Klebsiella pneumoniae (ESBL and CRK) across eleven European countries over eleven years. The fit could explain the large between-country variability of resistance in terms of consumption patterns and fitted differences in hospital transmission rates. Based on this fit, a counterfactual analysis found that reducing nosocomial transmission and antibiotic consumption in the hospital had the strongest impact on ESBL and CRK prevalence. Antibiotic consumption in the community also affected ESBL prevalence but its relative impact was weaker than inpatient consumption. Finally, we used the model to estimate a moderate fitness cost of CRK and ESBL at the population level. This work highlights the disproportionate role of antibiotic consumption in the hospital and of nosocomial transmission for resistance in gram-negative bacteria at a European level. This indicates that infection control and antibiotic stewardship measures should play a major role in limiting resistance even at the national or regional level. Public Library of Science 2021-01-29 /pmc/articles/PMC7888642/ /pubmed/33513129 http://dx.doi.org/10.1371/journal.pcbi.1008446 Text en © 2021 Kachalov et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kachalov, Viacheslav N.
Nguyen, Huyen
Balakrishna, Suraj
Salazar-Vizcaya, Luisa
Sommerstein, Rami
Kuster, Stefan P.
Hauser, Anthony
Abel zur Wiesch, Pia
Klein, Eili
Kouyos, Roger D.
Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level
title Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level
title_full Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level
title_fullStr Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level
title_full_unstemmed Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level
title_short Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level
title_sort identifying the drivers of multidrug-resistant klebsiella pneumoniae at a european level
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7888642/
https://www.ncbi.nlm.nih.gov/pubmed/33513129
http://dx.doi.org/10.1371/journal.pcbi.1008446
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