Cargando…

Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis

The complete mitochondrial genome of the Baillon's Crake Porzana pusilla (Gruiformes: Rallidae) are sequenced and annotated, which contained 37 typical genes. The length of the complete mitochondrial genome is 16,966 bp (GenBank No. MW043485), with As, Ts, Cs, Gs, and AT content of the mitochon...

Descripción completa

Detalles Bibliográficos
Autores principales: Lian, Ting, Yang, Chao, Yuan, Hao, Wang, Qing-Xiong, Du, Xiao-Juan, Li, Xue-Juan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889097/
https://www.ncbi.nlm.nih.gov/pubmed/33628937
http://dx.doi.org/10.1080/23802359.2021.1875915
_version_ 1783652242872598528
author Lian, Ting
Yang, Chao
Yuan, Hao
Wang, Qing-Xiong
Du, Xiao-Juan
Li, Xue-Juan
author_facet Lian, Ting
Yang, Chao
Yuan, Hao
Wang, Qing-Xiong
Du, Xiao-Juan
Li, Xue-Juan
author_sort Lian, Ting
collection PubMed
description The complete mitochondrial genome of the Baillon's Crake Porzana pusilla (Gruiformes: Rallidae) are sequenced and annotated, which contained 37 typical genes. The length of the complete mitochondrial genome is 16,966 bp (GenBank No. MW043485), with As, Ts, Cs, Gs, and AT content of the mitochondrial genome is 32.1, 23.2, 30.9, 13.8, and 55.3%, respectively. All protein-coding genes started with ATN except COX1 and ND5, which start with GTG, and all protein-coding genes end with a complete triplet codon (TAA, AGG, AGA, and TAG), except COX3, which ends with an incomplete T. The ND3 gene of P. pusilla with an extra C nucleotide in 174 site. Phylogenetic analysis revealed that the new sequenced species of P. pusilla was closer to the clade of Porzana fusca and Porzana paykullii, and all three Porzana are clustered into one branch.
format Online
Article
Text
id pubmed-7889097
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78890972021-02-23 Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis Lian, Ting Yang, Chao Yuan, Hao Wang, Qing-Xiong Du, Xiao-Juan Li, Xue-Juan Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of the Baillon's Crake Porzana pusilla (Gruiformes: Rallidae) are sequenced and annotated, which contained 37 typical genes. The length of the complete mitochondrial genome is 16,966 bp (GenBank No. MW043485), with As, Ts, Cs, Gs, and AT content of the mitochondrial genome is 32.1, 23.2, 30.9, 13.8, and 55.3%, respectively. All protein-coding genes started with ATN except COX1 and ND5, which start with GTG, and all protein-coding genes end with a complete triplet codon (TAA, AGG, AGA, and TAG), except COX3, which ends with an incomplete T. The ND3 gene of P. pusilla with an extra C nucleotide in 174 site. Phylogenetic analysis revealed that the new sequenced species of P. pusilla was closer to the clade of Porzana fusca and Porzana paykullii, and all three Porzana are clustered into one branch. Taylor & Francis 2021-02-12 /pmc/articles/PMC7889097/ /pubmed/33628937 http://dx.doi.org/10.1080/23802359.2021.1875915 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lian, Ting
Yang, Chao
Yuan, Hao
Wang, Qing-Xiong
Du, Xiao-Juan
Li, Xue-Juan
Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis
title Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis
title_full Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis
title_fullStr Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis
title_full_unstemmed Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis
title_short Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis
title_sort characterization of the complete mitogenomes of baillon's crake porzana pusilla and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889097/
https://www.ncbi.nlm.nih.gov/pubmed/33628937
http://dx.doi.org/10.1080/23802359.2021.1875915
work_keys_str_mv AT lianting characterizationofthecompletemitogenomesofbaillonscrakeporzanapusillaandphylogeneticanalysis
AT yangchao characterizationofthecompletemitogenomesofbaillonscrakeporzanapusillaandphylogeneticanalysis
AT yuanhao characterizationofthecompletemitogenomesofbaillonscrakeporzanapusillaandphylogeneticanalysis
AT wangqingxiong characterizationofthecompletemitogenomesofbaillonscrakeporzanapusillaandphylogeneticanalysis
AT duxiaojuan characterizationofthecompletemitogenomesofbaillonscrakeporzanapusillaandphylogeneticanalysis
AT lixuejuan characterizationofthecompletemitogenomesofbaillonscrakeporzanapusillaandphylogeneticanalysis