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Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis
The complete mitochondrial genome of the Baillon's Crake Porzana pusilla (Gruiformes: Rallidae) are sequenced and annotated, which contained 37 typical genes. The length of the complete mitochondrial genome is 16,966 bp (GenBank No. MW043485), with As, Ts, Cs, Gs, and AT content of the mitochon...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889097/ https://www.ncbi.nlm.nih.gov/pubmed/33628937 http://dx.doi.org/10.1080/23802359.2021.1875915 |
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author | Lian, Ting Yang, Chao Yuan, Hao Wang, Qing-Xiong Du, Xiao-Juan Li, Xue-Juan |
author_facet | Lian, Ting Yang, Chao Yuan, Hao Wang, Qing-Xiong Du, Xiao-Juan Li, Xue-Juan |
author_sort | Lian, Ting |
collection | PubMed |
description | The complete mitochondrial genome of the Baillon's Crake Porzana pusilla (Gruiformes: Rallidae) are sequenced and annotated, which contained 37 typical genes. The length of the complete mitochondrial genome is 16,966 bp (GenBank No. MW043485), with As, Ts, Cs, Gs, and AT content of the mitochondrial genome is 32.1, 23.2, 30.9, 13.8, and 55.3%, respectively. All protein-coding genes started with ATN except COX1 and ND5, which start with GTG, and all protein-coding genes end with a complete triplet codon (TAA, AGG, AGA, and TAG), except COX3, which ends with an incomplete T. The ND3 gene of P. pusilla with an extra C nucleotide in 174 site. Phylogenetic analysis revealed that the new sequenced species of P. pusilla was closer to the clade of Porzana fusca and Porzana paykullii, and all three Porzana are clustered into one branch. |
format | Online Article Text |
id | pubmed-7889097 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78890972021-02-23 Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis Lian, Ting Yang, Chao Yuan, Hao Wang, Qing-Xiong Du, Xiao-Juan Li, Xue-Juan Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of the Baillon's Crake Porzana pusilla (Gruiformes: Rallidae) are sequenced and annotated, which contained 37 typical genes. The length of the complete mitochondrial genome is 16,966 bp (GenBank No. MW043485), with As, Ts, Cs, Gs, and AT content of the mitochondrial genome is 32.1, 23.2, 30.9, 13.8, and 55.3%, respectively. All protein-coding genes started with ATN except COX1 and ND5, which start with GTG, and all protein-coding genes end with a complete triplet codon (TAA, AGG, AGA, and TAG), except COX3, which ends with an incomplete T. The ND3 gene of P. pusilla with an extra C nucleotide in 174 site. Phylogenetic analysis revealed that the new sequenced species of P. pusilla was closer to the clade of Porzana fusca and Porzana paykullii, and all three Porzana are clustered into one branch. Taylor & Francis 2021-02-12 /pmc/articles/PMC7889097/ /pubmed/33628937 http://dx.doi.org/10.1080/23802359.2021.1875915 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Lian, Ting Yang, Chao Yuan, Hao Wang, Qing-Xiong Du, Xiao-Juan Li, Xue-Juan Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis |
title | Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis |
title_full | Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis |
title_fullStr | Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis |
title_full_unstemmed | Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis |
title_short | Characterization of the complete mitogenomes of Baillon's Crake Porzana pusilla and phylogenetic analysis |
title_sort | characterization of the complete mitogenomes of baillon's crake porzana pusilla and phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889097/ https://www.ncbi.nlm.nih.gov/pubmed/33628937 http://dx.doi.org/10.1080/23802359.2021.1875915 |
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