Cargando…
The complete mitochondrial DNA for the Fujian Bamboo-leaf Frog Odorrana exiliversabilis (Anura: Ranidae) by next-generation sequencing
The complete mitochondrial DNA (mtDNA) for Odorrana exiliversabilisLi, Ye and Fei 2001 (Anura: Ranidae) was determined in this study. The length of complete mtDNA was 17,122 bp, including 13 PCGs (COI-III, ND1-6, ND4L, ATP6, ATP8 and CYTB), 25 tRNA genes, 2 rRNA genes, 2 non-coding regions of a L-st...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889110/ https://www.ncbi.nlm.nih.gov/pubmed/33628933 http://dx.doi.org/10.1080/23802359.2021.1875906 |
_version_ | 1783652244984430592 |
---|---|
author | Zhong, Jun-Jie Ma, Li Lin, Zhi-Hua Ding, Guo-Hua Luo, Si-Te |
author_facet | Zhong, Jun-Jie Ma, Li Lin, Zhi-Hua Ding, Guo-Hua Luo, Si-Te |
author_sort | Zhong, Jun-Jie |
collection | PubMed |
description | The complete mitochondrial DNA (mtDNA) for Odorrana exiliversabilisLi, Ye and Fei 2001 (Anura: Ranidae) was determined in this study. The length of complete mtDNA was 17,122 bp, including 13 PCGs (COI-III, ND1-6, ND4L, ATP6, ATP8 and CYTB), 25 tRNA genes, 2 rRNA genes, 2 non-coding regions of a L-strand replication origin and a control region. The overall base composition of the sequence is 28.27% T, 28.27% C, 28.52% A, and 14.94% G, with a total A + T content of 56.79%. The phylogenetic tree showed that O. exiliversabilis was the sister species of O. tormota, and formed a monophyletic clade with other Odorrana species. These data provide a powerful tool for evolutionary biology and population genetics of genus Odorrana. |
format | Online Article Text |
id | pubmed-7889110 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78891102021-02-23 The complete mitochondrial DNA for the Fujian Bamboo-leaf Frog Odorrana exiliversabilis (Anura: Ranidae) by next-generation sequencing Zhong, Jun-Jie Ma, Li Lin, Zhi-Hua Ding, Guo-Hua Luo, Si-Te Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial DNA (mtDNA) for Odorrana exiliversabilisLi, Ye and Fei 2001 (Anura: Ranidae) was determined in this study. The length of complete mtDNA was 17,122 bp, including 13 PCGs (COI-III, ND1-6, ND4L, ATP6, ATP8 and CYTB), 25 tRNA genes, 2 rRNA genes, 2 non-coding regions of a L-strand replication origin and a control region. The overall base composition of the sequence is 28.27% T, 28.27% C, 28.52% A, and 14.94% G, with a total A + T content of 56.79%. The phylogenetic tree showed that O. exiliversabilis was the sister species of O. tormota, and formed a monophyletic clade with other Odorrana species. These data provide a powerful tool for evolutionary biology and population genetics of genus Odorrana. Taylor & Francis 2021-02-12 /pmc/articles/PMC7889110/ /pubmed/33628933 http://dx.doi.org/10.1080/23802359.2021.1875906 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhong, Jun-Jie Ma, Li Lin, Zhi-Hua Ding, Guo-Hua Luo, Si-Te The complete mitochondrial DNA for the Fujian Bamboo-leaf Frog Odorrana exiliversabilis (Anura: Ranidae) by next-generation sequencing |
title | The complete mitochondrial DNA for the Fujian Bamboo-leaf Frog Odorrana exiliversabilis (Anura: Ranidae) by next-generation sequencing |
title_full | The complete mitochondrial DNA for the Fujian Bamboo-leaf Frog Odorrana exiliversabilis (Anura: Ranidae) by next-generation sequencing |
title_fullStr | The complete mitochondrial DNA for the Fujian Bamboo-leaf Frog Odorrana exiliversabilis (Anura: Ranidae) by next-generation sequencing |
title_full_unstemmed | The complete mitochondrial DNA for the Fujian Bamboo-leaf Frog Odorrana exiliversabilis (Anura: Ranidae) by next-generation sequencing |
title_short | The complete mitochondrial DNA for the Fujian Bamboo-leaf Frog Odorrana exiliversabilis (Anura: Ranidae) by next-generation sequencing |
title_sort | complete mitochondrial dna for the fujian bamboo-leaf frog odorrana exiliversabilis (anura: ranidae) by next-generation sequencing |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889110/ https://www.ncbi.nlm.nih.gov/pubmed/33628933 http://dx.doi.org/10.1080/23802359.2021.1875906 |
work_keys_str_mv | AT zhongjunjie thecompletemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing AT mali thecompletemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing AT linzhihua thecompletemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing AT dingguohua thecompletemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing AT luosite thecompletemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing AT zhongjunjie completemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing AT mali completemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing AT linzhihua completemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing AT dingguohua completemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing AT luosite completemitochondrialdnaforthefujianbambooleaffrogodorranaexiliversabilisanuraranidaebynextgenerationsequencing |