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Complete chloroplast genome of adonis amurensis (ranunculaceae), an important cardiac folk medicinal plant in east asia

Adonis amurensis Regel et Radde is an important cardiac folk medicinal plant which endemic to Northeast Asia. We determined the first complete chloroplast genome of A. amurensis using genome skimming approach. The cp genome was 157,032 bp long, with a large single-copy region (LSC) of 86,218 bp and...

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Autores principales: Zhang, Li-Qiu, Zhang, Xiao-Yan, Hu, Yan-Wu, Sun, Ren-Shuang, Yu, Jun-Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889182/
https://www.ncbi.nlm.nih.gov/pubmed/33628938
http://dx.doi.org/10.1080/23802359.2021.1875916
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author Zhang, Li-Qiu
Zhang, Xiao-Yan
Hu, Yan-Wu
Sun, Ren-Shuang
Yu, Jun-Lin
author_facet Zhang, Li-Qiu
Zhang, Xiao-Yan
Hu, Yan-Wu
Sun, Ren-Shuang
Yu, Jun-Lin
author_sort Zhang, Li-Qiu
collection PubMed
description Adonis amurensis Regel et Radde is an important cardiac folk medicinal plant which endemic to Northeast Asia. We determined the first complete chloroplast genome of A. amurensis using genome skimming approach. The cp genome was 157,032 bp long, with a large single-copy region (LSC) of 86,218 bp and a small single-copy region (SSC) of 18,212 bp separated by a pair of inverted repeats (IRs) of 26,301 bp. It encodes 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. We also reconstructed the phylogeny of Adonideae and Isopyreae using maximum likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis indicated that A. amurensis is close related with Adonis sutchuenensis.
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spelling pubmed-78891822021-02-23 Complete chloroplast genome of adonis amurensis (ranunculaceae), an important cardiac folk medicinal plant in east asia Zhang, Li-Qiu Zhang, Xiao-Yan Hu, Yan-Wu Sun, Ren-Shuang Yu, Jun-Lin Mitochondrial DNA B Resour Mitogenome Announcement Adonis amurensis Regel et Radde is an important cardiac folk medicinal plant which endemic to Northeast Asia. We determined the first complete chloroplast genome of A. amurensis using genome skimming approach. The cp genome was 157,032 bp long, with a large single-copy region (LSC) of 86,218 bp and a small single-copy region (SSC) of 18,212 bp separated by a pair of inverted repeats (IRs) of 26,301 bp. It encodes 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. We also reconstructed the phylogeny of Adonideae and Isopyreae using maximum likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis indicated that A. amurensis is close related with Adonis sutchuenensis. Taylor & Francis 2021-02-12 /pmc/articles/PMC7889182/ /pubmed/33628938 http://dx.doi.org/10.1080/23802359.2021.1875916 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Li-Qiu
Zhang, Xiao-Yan
Hu, Yan-Wu
Sun, Ren-Shuang
Yu, Jun-Lin
Complete chloroplast genome of adonis amurensis (ranunculaceae), an important cardiac folk medicinal plant in east asia
title Complete chloroplast genome of adonis amurensis (ranunculaceae), an important cardiac folk medicinal plant in east asia
title_full Complete chloroplast genome of adonis amurensis (ranunculaceae), an important cardiac folk medicinal plant in east asia
title_fullStr Complete chloroplast genome of adonis amurensis (ranunculaceae), an important cardiac folk medicinal plant in east asia
title_full_unstemmed Complete chloroplast genome of adonis amurensis (ranunculaceae), an important cardiac folk medicinal plant in east asia
title_short Complete chloroplast genome of adonis amurensis (ranunculaceae), an important cardiac folk medicinal plant in east asia
title_sort complete chloroplast genome of adonis amurensis (ranunculaceae), an important cardiac folk medicinal plant in east asia
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889182/
https://www.ncbi.nlm.nih.gov/pubmed/33628938
http://dx.doi.org/10.1080/23802359.2021.1875916
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