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Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis

Diachrysia nadeja is a polyphagous herbivorous moth within the family Noctuidae. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of D. nadeja. This mitogenome was 15,242 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and 2 ri...

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Autores principales: Gao, Shanshan, Xue, Shuang, Zhang, Yuanchen, Wang, Jingshun, Zhang, Kunpeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889200/
https://www.ncbi.nlm.nih.gov/pubmed/33628876
http://dx.doi.org/10.1080/23802359.2020.1870881
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author Gao, Shanshan
Xue, Shuang
Zhang, Yuanchen
Wang, Jingshun
Zhang, Kunpeng
author_facet Gao, Shanshan
Xue, Shuang
Zhang, Yuanchen
Wang, Jingshun
Zhang, Kunpeng
author_sort Gao, Shanshan
collection PubMed
description Diachrysia nadeja is a polyphagous herbivorous moth within the family Noctuidae. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of D. nadeja. This mitogenome was 15,242 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and 2 ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Noctuidae. Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. Most of the PCGs terminated with the stop codon TAA, whereas cox1, cox2, and nad4 end with the incomplete codon T−. The whole mitogenome exhibited heavy AT nucleotide bias (80.5%). Phylogenetic analysis showed that D. nadeja got together with three Ctenoplusia species (C. agnata, C. limbirena, and C. albostriata) with high support value, indicating Diachrysia had a closer relationship with Ctenoplusia within Noctuidae.
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spelling pubmed-78892002021-02-23 Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis Gao, Shanshan Xue, Shuang Zhang, Yuanchen Wang, Jingshun Zhang, Kunpeng Mitochondrial DNA B Resour Mitogenome Announcement Diachrysia nadeja is a polyphagous herbivorous moth within the family Noctuidae. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of D. nadeja. This mitogenome was 15,242 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and 2 ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Noctuidae. Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. Most of the PCGs terminated with the stop codon TAA, whereas cox1, cox2, and nad4 end with the incomplete codon T−. The whole mitogenome exhibited heavy AT nucleotide bias (80.5%). Phylogenetic analysis showed that D. nadeja got together with three Ctenoplusia species (C. agnata, C. limbirena, and C. albostriata) with high support value, indicating Diachrysia had a closer relationship with Ctenoplusia within Noctuidae. Taylor & Francis 2021-02-11 /pmc/articles/PMC7889200/ /pubmed/33628876 http://dx.doi.org/10.1080/23802359.2020.1870881 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Gao, Shanshan
Xue, Shuang
Zhang, Yuanchen
Wang, Jingshun
Zhang, Kunpeng
Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis
title Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis
title_full Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis
title_fullStr Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis
title_full_unstemmed Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis
title_short Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis
title_sort mitochondrial genome of diachrysia nadeja (lepidoptera: noctuoidea: noctuidae) and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889200/
https://www.ncbi.nlm.nih.gov/pubmed/33628876
http://dx.doi.org/10.1080/23802359.2020.1870881
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