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Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis
Diachrysia nadeja is a polyphagous herbivorous moth within the family Noctuidae. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of D. nadeja. This mitogenome was 15,242 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and 2 ri...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889200/ https://www.ncbi.nlm.nih.gov/pubmed/33628876 http://dx.doi.org/10.1080/23802359.2020.1870881 |
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author | Gao, Shanshan Xue, Shuang Zhang, Yuanchen Wang, Jingshun Zhang, Kunpeng |
author_facet | Gao, Shanshan Xue, Shuang Zhang, Yuanchen Wang, Jingshun Zhang, Kunpeng |
author_sort | Gao, Shanshan |
collection | PubMed |
description | Diachrysia nadeja is a polyphagous herbivorous moth within the family Noctuidae. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of D. nadeja. This mitogenome was 15,242 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and 2 ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Noctuidae. Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. Most of the PCGs terminated with the stop codon TAA, whereas cox1, cox2, and nad4 end with the incomplete codon T−. The whole mitogenome exhibited heavy AT nucleotide bias (80.5%). Phylogenetic analysis showed that D. nadeja got together with three Ctenoplusia species (C. agnata, C. limbirena, and C. albostriata) with high support value, indicating Diachrysia had a closer relationship with Ctenoplusia within Noctuidae. |
format | Online Article Text |
id | pubmed-7889200 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78892002021-02-23 Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis Gao, Shanshan Xue, Shuang Zhang, Yuanchen Wang, Jingshun Zhang, Kunpeng Mitochondrial DNA B Resour Mitogenome Announcement Diachrysia nadeja is a polyphagous herbivorous moth within the family Noctuidae. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of D. nadeja. This mitogenome was 15,242 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and 2 ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Noctuidae. Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. Most of the PCGs terminated with the stop codon TAA, whereas cox1, cox2, and nad4 end with the incomplete codon T−. The whole mitogenome exhibited heavy AT nucleotide bias (80.5%). Phylogenetic analysis showed that D. nadeja got together with three Ctenoplusia species (C. agnata, C. limbirena, and C. albostriata) with high support value, indicating Diachrysia had a closer relationship with Ctenoplusia within Noctuidae. Taylor & Francis 2021-02-11 /pmc/articles/PMC7889200/ /pubmed/33628876 http://dx.doi.org/10.1080/23802359.2020.1870881 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Gao, Shanshan Xue, Shuang Zhang, Yuanchen Wang, Jingshun Zhang, Kunpeng Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis |
title | Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis |
title_full | Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis |
title_fullStr | Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis |
title_full_unstemmed | Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis |
title_short | Mitochondrial genome of Diachrysia nadeja (Lepidoptera: Noctuoidea: Noctuidae) and phylogenetic analysis |
title_sort | mitochondrial genome of diachrysia nadeja (lepidoptera: noctuoidea: noctuidae) and phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889200/ https://www.ncbi.nlm.nih.gov/pubmed/33628876 http://dx.doi.org/10.1080/23802359.2020.1870881 |
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