The complete chloroplast genome of Chinese medicinal herb Belamcanda chinensis (L.) Redouté (Iridaceae)

The species of Belamcanda chinensis (L.) Redouté. is one of the Chinese traditional medicinal herb. In this study, we first report the complete chloroplast (cp) genome of B. chinensis. The chloroplast (cp) genome was determined to be 153,735 bp and the GC contents was 37.9%. The sequence includes a...

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Autores principales: Li, Cuicui, Hu, Saiwen, Ding, Yining, Bi, Guangyao, Su, Chun, Xia, Zhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889214/
https://www.ncbi.nlm.nih.gov/pubmed/33628873
http://dx.doi.org/10.1080/23802359.2020.1866455
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author Li, Cuicui
Hu, Saiwen
Ding, Yining
Bi, Guangyao
Su, Chun
Xia, Zhi
author_facet Li, Cuicui
Hu, Saiwen
Ding, Yining
Bi, Guangyao
Su, Chun
Xia, Zhi
author_sort Li, Cuicui
collection PubMed
description The species of Belamcanda chinensis (L.) Redouté. is one of the Chinese traditional medicinal herb. In this study, we first report the complete chloroplast (cp) genome of B. chinensis. The chloroplast (cp) genome was determined to be 153,735 bp and the GC contents was 37.9%. The sequence includes a large single-copy (LSC) region of 83, 199 bp, a small single-copy (SSC) region of 18,168 bp, and two separated inverted regions of 26,184 bp each. It contains 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Based on 10 chloroplast genomes data, the maximum likelihood phylogenetic analysis revealed that B. chinensis was sister to Iris (Bootstrap = 100%) within Iridaceae. This result will be helpful for the conservation and breeding programs of the B. chinensis.
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spelling pubmed-78892142021-02-23 The complete chloroplast genome of Chinese medicinal herb Belamcanda chinensis (L.) Redouté (Iridaceae) Li, Cuicui Hu, Saiwen Ding, Yining Bi, Guangyao Su, Chun Xia, Zhi Mitochondrial DNA B Resour Mitogenome Announcement The species of Belamcanda chinensis (L.) Redouté. is one of the Chinese traditional medicinal herb. In this study, we first report the complete chloroplast (cp) genome of B. chinensis. The chloroplast (cp) genome was determined to be 153,735 bp and the GC contents was 37.9%. The sequence includes a large single-copy (LSC) region of 83, 199 bp, a small single-copy (SSC) region of 18,168 bp, and two separated inverted regions of 26,184 bp each. It contains 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Based on 10 chloroplast genomes data, the maximum likelihood phylogenetic analysis revealed that B. chinensis was sister to Iris (Bootstrap = 100%) within Iridaceae. This result will be helpful for the conservation and breeding programs of the B. chinensis. Taylor & Francis 2021-02-08 /pmc/articles/PMC7889214/ /pubmed/33628873 http://dx.doi.org/10.1080/23802359.2020.1866455 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Cuicui
Hu, Saiwen
Ding, Yining
Bi, Guangyao
Su, Chun
Xia, Zhi
The complete chloroplast genome of Chinese medicinal herb Belamcanda chinensis (L.) Redouté (Iridaceae)
title The complete chloroplast genome of Chinese medicinal herb Belamcanda chinensis (L.) Redouté (Iridaceae)
title_full The complete chloroplast genome of Chinese medicinal herb Belamcanda chinensis (L.) Redouté (Iridaceae)
title_fullStr The complete chloroplast genome of Chinese medicinal herb Belamcanda chinensis (L.) Redouté (Iridaceae)
title_full_unstemmed The complete chloroplast genome of Chinese medicinal herb Belamcanda chinensis (L.) Redouté (Iridaceae)
title_short The complete chloroplast genome of Chinese medicinal herb Belamcanda chinensis (L.) Redouté (Iridaceae)
title_sort complete chloroplast genome of chinese medicinal herb belamcanda chinensis (l.) redouté (iridaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889214/
https://www.ncbi.nlm.nih.gov/pubmed/33628873
http://dx.doi.org/10.1080/23802359.2020.1866455
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