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The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae)

We describe the complete mitochondrial genome of the endangered fish Sinocyclocheilus aluensis. It is a circular molecule of 16,583 bp in size with a D-loop region and contains 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes and 13 protein-coding genes, and all genes show the typical gene...

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Autores principales: Cui, Lili, Miao, Xiangjun, Yang, Yanchun, Zheng, Cuilian, Lei, Chunyun, Li, Mingli, Li, Guanghua, Gao, Haitao, Wang, Xiaoyi, Lu, Shaoxiong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889236/
https://www.ncbi.nlm.nih.gov/pubmed/33628920
http://dx.doi.org/10.1080/23802359.2020.1756482
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author Cui, Lili
Miao, Xiangjun
Yang, Yanchun
Zheng, Cuilian
Lei, Chunyun
Li, Mingli
Li, Guanghua
Gao, Haitao
Wang, Xiaoyi
Lu, Shaoxiong
author_facet Cui, Lili
Miao, Xiangjun
Yang, Yanchun
Zheng, Cuilian
Lei, Chunyun
Li, Mingli
Li, Guanghua
Gao, Haitao
Wang, Xiaoyi
Lu, Shaoxiong
author_sort Cui, Lili
collection PubMed
description We describe the complete mitochondrial genome of the endangered fish Sinocyclocheilus aluensis. It is a circular molecule of 16,583 bp in size with a D-loop region and contains 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes and 13 protein-coding genes, and all genes show the typical gene arrangement conforming to the vertebrate consensus. The overall base composition of S. aluensis mitogenome is 31.1% for A, 26.9% for C, 16.6% for G, and 25.4% for T. The percentage of G + C content is 43.5%. Phylogenetic analysis demonstrated that all Sinocyclocheilus species clustered together and formed a monophyletic group. The mitochondrial genome sequencing for S. aluensis in this study provides important molecular data for further evolutionary research for Sinocyclocheilus.
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spelling pubmed-78892362021-02-23 The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae) Cui, Lili Miao, Xiangjun Yang, Yanchun Zheng, Cuilian Lei, Chunyun Li, Mingli Li, Guanghua Gao, Haitao Wang, Xiaoyi Lu, Shaoxiong Mitochondrial DNA B Resour Mitogenome Announcement We describe the complete mitochondrial genome of the endangered fish Sinocyclocheilus aluensis. It is a circular molecule of 16,583 bp in size with a D-loop region and contains 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes and 13 protein-coding genes, and all genes show the typical gene arrangement conforming to the vertebrate consensus. The overall base composition of S. aluensis mitogenome is 31.1% for A, 26.9% for C, 16.6% for G, and 25.4% for T. The percentage of G + C content is 43.5%. Phylogenetic analysis demonstrated that all Sinocyclocheilus species clustered together and formed a monophyletic group. The mitochondrial genome sequencing for S. aluensis in this study provides important molecular data for further evolutionary research for Sinocyclocheilus. Taylor & Francis 2021-02-15 /pmc/articles/PMC7889236/ /pubmed/33628920 http://dx.doi.org/10.1080/23802359.2020.1756482 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Cui, Lili
Miao, Xiangjun
Yang, Yanchun
Zheng, Cuilian
Lei, Chunyun
Li, Mingli
Li, Guanghua
Gao, Haitao
Wang, Xiaoyi
Lu, Shaoxiong
The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae)
title The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae)
title_full The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae)
title_fullStr The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae)
title_full_unstemmed The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae)
title_short The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae)
title_sort complete mitochondrial genome of sinocyclocheilus aluensis (cyprinoidea: cyprinidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889236/
https://www.ncbi.nlm.nih.gov/pubmed/33628920
http://dx.doi.org/10.1080/23802359.2020.1756482
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