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The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae)
We describe the complete mitochondrial genome of the endangered fish Sinocyclocheilus aluensis. It is a circular molecule of 16,583 bp in size with a D-loop region and contains 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes and 13 protein-coding genes, and all genes show the typical gene...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889236/ https://www.ncbi.nlm.nih.gov/pubmed/33628920 http://dx.doi.org/10.1080/23802359.2020.1756482 |
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author | Cui, Lili Miao, Xiangjun Yang, Yanchun Zheng, Cuilian Lei, Chunyun Li, Mingli Li, Guanghua Gao, Haitao Wang, Xiaoyi Lu, Shaoxiong |
author_facet | Cui, Lili Miao, Xiangjun Yang, Yanchun Zheng, Cuilian Lei, Chunyun Li, Mingli Li, Guanghua Gao, Haitao Wang, Xiaoyi Lu, Shaoxiong |
author_sort | Cui, Lili |
collection | PubMed |
description | We describe the complete mitochondrial genome of the endangered fish Sinocyclocheilus aluensis. It is a circular molecule of 16,583 bp in size with a D-loop region and contains 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes and 13 protein-coding genes, and all genes show the typical gene arrangement conforming to the vertebrate consensus. The overall base composition of S. aluensis mitogenome is 31.1% for A, 26.9% for C, 16.6% for G, and 25.4% for T. The percentage of G + C content is 43.5%. Phylogenetic analysis demonstrated that all Sinocyclocheilus species clustered together and formed a monophyletic group. The mitochondrial genome sequencing for S. aluensis in this study provides important molecular data for further evolutionary research for Sinocyclocheilus. |
format | Online Article Text |
id | pubmed-7889236 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78892362021-02-23 The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae) Cui, Lili Miao, Xiangjun Yang, Yanchun Zheng, Cuilian Lei, Chunyun Li, Mingli Li, Guanghua Gao, Haitao Wang, Xiaoyi Lu, Shaoxiong Mitochondrial DNA B Resour Mitogenome Announcement We describe the complete mitochondrial genome of the endangered fish Sinocyclocheilus aluensis. It is a circular molecule of 16,583 bp in size with a D-loop region and contains 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes and 13 protein-coding genes, and all genes show the typical gene arrangement conforming to the vertebrate consensus. The overall base composition of S. aluensis mitogenome is 31.1% for A, 26.9% for C, 16.6% for G, and 25.4% for T. The percentage of G + C content is 43.5%. Phylogenetic analysis demonstrated that all Sinocyclocheilus species clustered together and formed a monophyletic group. The mitochondrial genome sequencing for S. aluensis in this study provides important molecular data for further evolutionary research for Sinocyclocheilus. Taylor & Francis 2021-02-15 /pmc/articles/PMC7889236/ /pubmed/33628920 http://dx.doi.org/10.1080/23802359.2020.1756482 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Cui, Lili Miao, Xiangjun Yang, Yanchun Zheng, Cuilian Lei, Chunyun Li, Mingli Li, Guanghua Gao, Haitao Wang, Xiaoyi Lu, Shaoxiong The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae) |
title | The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae) |
title_full | The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae) |
title_fullStr | The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae) |
title_full_unstemmed | The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae) |
title_short | The complete mitochondrial genome of Sinocyclocheilus aluensis (Cyprinoidea: Cyprinidae) |
title_sort | complete mitochondrial genome of sinocyclocheilus aluensis (cyprinoidea: cyprinidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889236/ https://www.ncbi.nlm.nih.gov/pubmed/33628920 http://dx.doi.org/10.1080/23802359.2020.1756482 |
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