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The complete chloroplast genome of Aganope dinghuensis (Fabaceae)
Aganope is a genus in the family Fabaceae, with only 11 species. They are distributed throughout Asia and Africa. Aganope dinghuensis, a newly reported species, is native to China with a restricted distribution. We, therefore, report its complete chloroplast genome for better future conservation. Th...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889246/ https://www.ncbi.nlm.nih.gov/pubmed/33628888 http://dx.doi.org/10.1080/23802359.2020.1871437 |
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author | Wang, Zheng-Feng Qin, Qiao-Mei Cao, Hong-Lin |
author_facet | Wang, Zheng-Feng Qin, Qiao-Mei Cao, Hong-Lin |
author_sort | Wang, Zheng-Feng |
collection | PubMed |
description | Aganope is a genus in the family Fabaceae, with only 11 species. They are distributed throughout Asia and Africa. Aganope dinghuensis, a newly reported species, is native to China with a restricted distribution. We, therefore, report its complete chloroplast genome for better future conservation. The chloroplast genome of A. dinghuensis is 143,690 bp, with a GC content of 35.32%. In the genome, a pair of inverted repeat regions of 13,015 bp each, a large single-copy region of 98,824 bp, and a small single-copy region of 18,836 bp were identified. Genome annotation identified 115 genes, comprising 74 protein-coding genes, 8 ribosomal RNA genes, and 33 transfer RNA genes. Repeat analysis indicates that the chloroplast genome of A. dinghuensis contains 126 simple sequence repeats (SSR), of which the majority are A/T mononucleotides. Phylogenetic analysis revealed that A. dinghuensis is a sister to the clade that includes Indigofera tinctoria, Desmodium uncinatum, Sarcodum scandens, Wisteria brachybotrys, and Callerya nitida. |
format | Online Article Text |
id | pubmed-7889246 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78892462021-02-23 The complete chloroplast genome of Aganope dinghuensis (Fabaceae) Wang, Zheng-Feng Qin, Qiao-Mei Cao, Hong-Lin Mitochondrial DNA B Resour Mitogenome Announcement Aganope is a genus in the family Fabaceae, with only 11 species. They are distributed throughout Asia and Africa. Aganope dinghuensis, a newly reported species, is native to China with a restricted distribution. We, therefore, report its complete chloroplast genome for better future conservation. The chloroplast genome of A. dinghuensis is 143,690 bp, with a GC content of 35.32%. In the genome, a pair of inverted repeat regions of 13,015 bp each, a large single-copy region of 98,824 bp, and a small single-copy region of 18,836 bp were identified. Genome annotation identified 115 genes, comprising 74 protein-coding genes, 8 ribosomal RNA genes, and 33 transfer RNA genes. Repeat analysis indicates that the chloroplast genome of A. dinghuensis contains 126 simple sequence repeats (SSR), of which the majority are A/T mononucleotides. Phylogenetic analysis revealed that A. dinghuensis is a sister to the clade that includes Indigofera tinctoria, Desmodium uncinatum, Sarcodum scandens, Wisteria brachybotrys, and Callerya nitida. Taylor & Francis 2021-02-09 /pmc/articles/PMC7889246/ /pubmed/33628888 http://dx.doi.org/10.1080/23802359.2020.1871437 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Wang, Zheng-Feng Qin, Qiao-Mei Cao, Hong-Lin The complete chloroplast genome of Aganope dinghuensis (Fabaceae) |
title | The complete chloroplast genome of Aganope dinghuensis (Fabaceae) |
title_full | The complete chloroplast genome of Aganope dinghuensis (Fabaceae) |
title_fullStr | The complete chloroplast genome of Aganope dinghuensis (Fabaceae) |
title_full_unstemmed | The complete chloroplast genome of Aganope dinghuensis (Fabaceae) |
title_short | The complete chloroplast genome of Aganope dinghuensis (Fabaceae) |
title_sort | complete chloroplast genome of aganope dinghuensis (fabaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889246/ https://www.ncbi.nlm.nih.gov/pubmed/33628888 http://dx.doi.org/10.1080/23802359.2020.1871437 |
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