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Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures
We implemented machine learning in the radiation biodosimetry field to quantitatively reconstruct neutron doses in mixed neutron + photon exposures, which are expected in improvised nuclear device detonations. Such individualized reconstructions are crucial for triage and treatment because neutrons...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889851/ https://www.ncbi.nlm.nih.gov/pubmed/33597632 http://dx.doi.org/10.1038/s41598-021-83575-5 |
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author | Shuryak, Igor Turner, Helen C. Pujol-Canadell, Monica Perrier, Jay R. Garty, Guy Brenner, David J. |
author_facet | Shuryak, Igor Turner, Helen C. Pujol-Canadell, Monica Perrier, Jay R. Garty, Guy Brenner, David J. |
author_sort | Shuryak, Igor |
collection | PubMed |
description | We implemented machine learning in the radiation biodosimetry field to quantitatively reconstruct neutron doses in mixed neutron + photon exposures, which are expected in improvised nuclear device detonations. Such individualized reconstructions are crucial for triage and treatment because neutrons are more biologically damaging than photons. We used a high-throughput micronucleus assay with automated scanning/imaging on lymphocytes from human blood ex-vivo irradiated with 44 different combinations of 0–4 Gy neutrons and 0–15 Gy photons (542 blood samples), which include reanalysis of past experiments. We developed several metrics that describe micronuclei/cell probability distributions in binucleated cells, and used them as predictors in random forest (RF) and XGboost machine learning analyses to reconstruct the neutron dose in each sample. The probability of “overfitting” was minimized by training both algorithms with repeated cross-validation on a randomly-selected subset of the data, and measuring performance on the rest. RF achieved the best performance. Mean R(2) for actual vs. reconstructed neutron doses over 300 random training/testing splits was 0.869 (range 0.761 to 0.919) and root mean squared error was 0.239 (0.195 to 0.351) Gy. These results demonstrate the promising potential of machine learning to reconstruct the neutron dose component in clinically-relevant complex radiation exposure scenarios. |
format | Online Article Text |
id | pubmed-7889851 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-78898512021-02-22 Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures Shuryak, Igor Turner, Helen C. Pujol-Canadell, Monica Perrier, Jay R. Garty, Guy Brenner, David J. Sci Rep Article We implemented machine learning in the radiation biodosimetry field to quantitatively reconstruct neutron doses in mixed neutron + photon exposures, which are expected in improvised nuclear device detonations. Such individualized reconstructions are crucial for triage and treatment because neutrons are more biologically damaging than photons. We used a high-throughput micronucleus assay with automated scanning/imaging on lymphocytes from human blood ex-vivo irradiated with 44 different combinations of 0–4 Gy neutrons and 0–15 Gy photons (542 blood samples), which include reanalysis of past experiments. We developed several metrics that describe micronuclei/cell probability distributions in binucleated cells, and used them as predictors in random forest (RF) and XGboost machine learning analyses to reconstruct the neutron dose in each sample. The probability of “overfitting” was minimized by training both algorithms with repeated cross-validation on a randomly-selected subset of the data, and measuring performance on the rest. RF achieved the best performance. Mean R(2) for actual vs. reconstructed neutron doses over 300 random training/testing splits was 0.869 (range 0.761 to 0.919) and root mean squared error was 0.239 (0.195 to 0.351) Gy. These results demonstrate the promising potential of machine learning to reconstruct the neutron dose component in clinically-relevant complex radiation exposure scenarios. Nature Publishing Group UK 2021-02-17 /pmc/articles/PMC7889851/ /pubmed/33597632 http://dx.doi.org/10.1038/s41598-021-83575-5 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Shuryak, Igor Turner, Helen C. Pujol-Canadell, Monica Perrier, Jay R. Garty, Guy Brenner, David J. Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures |
title | Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures |
title_full | Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures |
title_fullStr | Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures |
title_full_unstemmed | Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures |
title_short | Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures |
title_sort | machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7889851/ https://www.ncbi.nlm.nih.gov/pubmed/33597632 http://dx.doi.org/10.1038/s41598-021-83575-5 |
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