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Data of de novo transcriptome assembly of the myxozoan parasite Tetracapsuloides bryosalmonae

Tetracapsuloides bryosalmonae, a myxozoan endoparasite, causes proliferative kidney disease in salmonids. The life cycle of T. bryosalmonae occurs between invertebrate bryozoan and vertebrate fish hosts. T. bryosalmonae develops in the body cavity of colonial bryozoan and spores are released from ma...

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Autores principales: Kumar, Gokhlesh, Ertl, Reinhard, Nilsen, Frank, Bartholomew, Jerri L., El-Matbouli, Mansour
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7890133/
https://www.ncbi.nlm.nih.gov/pubmed/33659593
http://dx.doi.org/10.1016/j.dib.2021.106831
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author Kumar, Gokhlesh
Ertl, Reinhard
Nilsen, Frank
Bartholomew, Jerri L.
El-Matbouli, Mansour
author_facet Kumar, Gokhlesh
Ertl, Reinhard
Nilsen, Frank
Bartholomew, Jerri L.
El-Matbouli, Mansour
author_sort Kumar, Gokhlesh
collection PubMed
description Tetracapsuloides bryosalmonae, a myxozoan endoparasite, causes proliferative kidney disease in salmonids. The life cycle of T. bryosalmonae occurs between invertebrate bryozoan and vertebrate fish hosts. T. bryosalmonae develops in the body cavity of colonial bryozoan and spores are released from mature spore sacs into the water likely through the vestibular pore and infect fish by attaching to their gills. However, very little is known about the transcriptome of this important parasite, which hampers studies into the molecular mechanisms of host-parasite interactions and understanding the parasite biology. In order to circumvent this limitation, we performed de novo transcriptome assembly on the sacs of T. bryosalmonae, collected from infected bryozoan Fredericella sultana. A total of 111.5 million filtered paired-end reads was obtained and assembled into 25,908 contigs corresponding to putative transcripts that were functionally annotated. More than 50% of the assembled transcripts (13,071 contigs) had a significant hit in NCBI non-redundant database. Based on Gene ontology annotation, the most highly scored categories of molecular function of the contigs were related to binding and catalytic activities in T. bryosalmonae. This study provides a global overview of the T. bryosalmonae transcriptome that will be a valuable resource for identifying virulence factors, gene discovery, genome annotation, and vaccine development applications. This data is accessible via NCBI BioProject (PRJNA680464).
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spelling pubmed-78901332021-03-02 Data of de novo transcriptome assembly of the myxozoan parasite Tetracapsuloides bryosalmonae Kumar, Gokhlesh Ertl, Reinhard Nilsen, Frank Bartholomew, Jerri L. El-Matbouli, Mansour Data Brief Data Article Tetracapsuloides bryosalmonae, a myxozoan endoparasite, causes proliferative kidney disease in salmonids. The life cycle of T. bryosalmonae occurs between invertebrate bryozoan and vertebrate fish hosts. T. bryosalmonae develops in the body cavity of colonial bryozoan and spores are released from mature spore sacs into the water likely through the vestibular pore and infect fish by attaching to their gills. However, very little is known about the transcriptome of this important parasite, which hampers studies into the molecular mechanisms of host-parasite interactions and understanding the parasite biology. In order to circumvent this limitation, we performed de novo transcriptome assembly on the sacs of T. bryosalmonae, collected from infected bryozoan Fredericella sultana. A total of 111.5 million filtered paired-end reads was obtained and assembled into 25,908 contigs corresponding to putative transcripts that were functionally annotated. More than 50% of the assembled transcripts (13,071 contigs) had a significant hit in NCBI non-redundant database. Based on Gene ontology annotation, the most highly scored categories of molecular function of the contigs were related to binding and catalytic activities in T. bryosalmonae. This study provides a global overview of the T. bryosalmonae transcriptome that will be a valuable resource for identifying virulence factors, gene discovery, genome annotation, and vaccine development applications. This data is accessible via NCBI BioProject (PRJNA680464). Elsevier 2021-02-04 /pmc/articles/PMC7890133/ /pubmed/33659593 http://dx.doi.org/10.1016/j.dib.2021.106831 Text en © 2021 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Kumar, Gokhlesh
Ertl, Reinhard
Nilsen, Frank
Bartholomew, Jerri L.
El-Matbouli, Mansour
Data of de novo transcriptome assembly of the myxozoan parasite Tetracapsuloides bryosalmonae
title Data of de novo transcriptome assembly of the myxozoan parasite Tetracapsuloides bryosalmonae
title_full Data of de novo transcriptome assembly of the myxozoan parasite Tetracapsuloides bryosalmonae
title_fullStr Data of de novo transcriptome assembly of the myxozoan parasite Tetracapsuloides bryosalmonae
title_full_unstemmed Data of de novo transcriptome assembly of the myxozoan parasite Tetracapsuloides bryosalmonae
title_short Data of de novo transcriptome assembly of the myxozoan parasite Tetracapsuloides bryosalmonae
title_sort data of de novo transcriptome assembly of the myxozoan parasite tetracapsuloides bryosalmonae
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7890133/
https://www.ncbi.nlm.nih.gov/pubmed/33659593
http://dx.doi.org/10.1016/j.dib.2021.106831
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