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Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study

Background: Diagnostic testing forms a major part of the UK’s response to the current coronavirus disease 2019 (COVID-19) pandemic with tests offered to anyone with a continuous cough, high temperature or anosmia. Testing capacity must be sufficient during the winter respiratory season when levels o...

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Autores principales: Eyre, Max T., Burns, Rachel, Kirkby, Victoria, Smith, Catherine, Denaxas, Spiros, Nguyen, Vincent, Hayward, Andrew, Shallcross, Laura, Fragaszy, Ellen, Aldridge, Robert W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7890379/
https://www.ncbi.nlm.nih.gov/pubmed/33655079
http://dx.doi.org/10.12688/wellcomeopenres.16304.2
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author Eyre, Max T.
Burns, Rachel
Kirkby, Victoria
Smith, Catherine
Denaxas, Spiros
Nguyen, Vincent
Hayward, Andrew
Shallcross, Laura
Fragaszy, Ellen
Aldridge, Robert W.
author_facet Eyre, Max T.
Burns, Rachel
Kirkby, Victoria
Smith, Catherine
Denaxas, Spiros
Nguyen, Vincent
Hayward, Andrew
Shallcross, Laura
Fragaszy, Ellen
Aldridge, Robert W.
author_sort Eyre, Max T.
collection PubMed
description Background: Diagnostic testing forms a major part of the UK’s response to the current coronavirus disease 2019 (COVID-19) pandemic with tests offered to anyone with a continuous cough, high temperature or anosmia. Testing capacity must be sufficient during the winter respiratory season when levels of cough and fever are high due to non-COVID-19 causes. This study aims to make predictions about the contribution of baseline cough or fever to future testing demand in the UK. Methods: In this analysis of the Bug Watch community cohort study, we estimated the incidence of cough or fever in England in 2018-2019. We then estimated the COVID-19 diagnostic testing rates required in the UK for baseline cough or fever cases for the period July 2020-June 2021. This was explored for different rates of the population requesting tests, four COVID-19 second wave scenarios and high and low baseline cough or fever incidence scenarios. Results: Under the high baseline cough or fever scenario, incidence in the UK is expected to rise rapidly from 250,708 (95%CI 181,095 - 347,080) cases per day in September to a peak of 444,660 (95%CI 353,084 - 559,988) in December. If 80% of these cases request tests, testing demand would exceed 1.4 million tests per week for five consecutive months. Demand was significantly lower in the low cough or fever incidence scenario, with 129,115 (95%CI 111,596 - 151,679) tests per day in January 2021, compared to 340,921 (95%CI 276,039 - 424,491) tests per day in the higher incidence scenario. Conclusions: Our results show that national COVID-19 testing demand is highly dependent on background cough or fever incidence. This study highlights that the UK’s response to the COVID-19 pandemic must ensure that a high proportion of people with symptoms request tests, and that testing capacity is sufficient to meet the high predicted demand.
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spelling pubmed-78903792021-03-01 Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study Eyre, Max T. Burns, Rachel Kirkby, Victoria Smith, Catherine Denaxas, Spiros Nguyen, Vincent Hayward, Andrew Shallcross, Laura Fragaszy, Ellen Aldridge, Robert W. Wellcome Open Res Research Article Background: Diagnostic testing forms a major part of the UK’s response to the current coronavirus disease 2019 (COVID-19) pandemic with tests offered to anyone with a continuous cough, high temperature or anosmia. Testing capacity must be sufficient during the winter respiratory season when levels of cough and fever are high due to non-COVID-19 causes. This study aims to make predictions about the contribution of baseline cough or fever to future testing demand in the UK. Methods: In this analysis of the Bug Watch community cohort study, we estimated the incidence of cough or fever in England in 2018-2019. We then estimated the COVID-19 diagnostic testing rates required in the UK for baseline cough or fever cases for the period July 2020-June 2021. This was explored for different rates of the population requesting tests, four COVID-19 second wave scenarios and high and low baseline cough or fever incidence scenarios. Results: Under the high baseline cough or fever scenario, incidence in the UK is expected to rise rapidly from 250,708 (95%CI 181,095 - 347,080) cases per day in September to a peak of 444,660 (95%CI 353,084 - 559,988) in December. If 80% of these cases request tests, testing demand would exceed 1.4 million tests per week for five consecutive months. Demand was significantly lower in the low cough or fever incidence scenario, with 129,115 (95%CI 111,596 - 151,679) tests per day in January 2021, compared to 340,921 (95%CI 276,039 - 424,491) tests per day in the higher incidence scenario. Conclusions: Our results show that national COVID-19 testing demand is highly dependent on background cough or fever incidence. This study highlights that the UK’s response to the COVID-19 pandemic must ensure that a high proportion of people with symptoms request tests, and that testing capacity is sufficient to meet the high predicted demand. F1000 Research Limited 2021-01-25 /pmc/articles/PMC7890379/ /pubmed/33655079 http://dx.doi.org/10.12688/wellcomeopenres.16304.2 Text en Copyright: © 2021 Eyre MT et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Eyre, Max T.
Burns, Rachel
Kirkby, Victoria
Smith, Catherine
Denaxas, Spiros
Nguyen, Vincent
Hayward, Andrew
Shallcross, Laura
Fragaszy, Ellen
Aldridge, Robert W.
Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study
title Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study
title_full Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study
title_fullStr Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study
title_full_unstemmed Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study
title_short Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study
title_sort impact of baseline cases of cough and fever on uk covid-19 diagnostic testing rates: estimates from the bug watch community cohort study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7890379/
https://www.ncbi.nlm.nih.gov/pubmed/33655079
http://dx.doi.org/10.12688/wellcomeopenres.16304.2
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