Cargando…
The immune‐related biomarker TEK inhibits the development of clear cell renal cell carcinoma (ccRCC) by regulating AKT phosphorylation
BACKGROUND: High immunogenicity is an important feature of ccRCC, but its underlying immune-related molecular mechanisms remain unclear. This study aimed to investigate the effect of immune-related gene TEK on ccRCC and its prognostic value. METHODS: The immune-related differentially expressed genes...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7890987/ https://www.ncbi.nlm.nih.gov/pubmed/33602230 http://dx.doi.org/10.1186/s12935-021-01830-1 |
_version_ | 1783652610149974016 |
---|---|
author | Chen, Siming Yu, Mengxue Ju, Lingao Wang, Gang Qian, Kaiyu Xiao, Yu Wang, Xinghuan |
author_facet | Chen, Siming Yu, Mengxue Ju, Lingao Wang, Gang Qian, Kaiyu Xiao, Yu Wang, Xinghuan |
author_sort | Chen, Siming |
collection | PubMed |
description | BACKGROUND: High immunogenicity is an important feature of ccRCC, but its underlying immune-related molecular mechanisms remain unclear. This study aimed to investigate the effect of immune-related gene TEK on ccRCC and its prognostic value. METHODS: The immune-related differentially expressed genes (DEGs) and transcription factors (TFs) in ccRCC were screened based on The Cancer Genome Atlas (TCGA) database, and a regulatory network of TF was constructed. Prognostic-related immune genes were screened by univariate Cox regression analysis and functional annotation was performed. Univariate and multivariate Cox regression analyses were performed to construct the immune gene risk model and identify the hub gene TEK that independently affected the prognosis of ccRCC. The effectiveness of the TEK was verified by external microarray datasets. The relationship between TEK and immune cells in ccRCC was evaluated based on Tumor Immune Estimation Resource (TIMER). The expression of TEK in clinical specimens was verified by qRT-PCR and immunohistochemical (IHC) staining. MTT and cloning formation assay were used to evaluate cell proliferation. Transwell assays were used to assess cell migration. Apoptosis was assessed by flow cytometry, and the expression of related proteins was detected by Western blot and immunofluorescence. RESULTS: We constructed a prognostic model consisting of 12 hub genes and performed risk scores to determine the relationship between these scores and prognosis. Through Cox regression analysis and survival analysis, TEK, an immune marker highly related to survival prognosis, was obtained and validated. In vitro experiments showed that knockdown of TEK promoted the proliferation and migration of ccRCC cells, and we found that TEK promoted apoptosis by regulating the phosphorylation of AKT, thereby inhibiting cell proliferation. CONCLUSIONS: TEK plays an important role in risk assessment and survival prediction for ccRCC patients as a new immune gene and maybe an emerging target for immunotherapy for ccRCC patients. |
format | Online Article Text |
id | pubmed-7890987 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-78909872021-02-22 The immune‐related biomarker TEK inhibits the development of clear cell renal cell carcinoma (ccRCC) by regulating AKT phosphorylation Chen, Siming Yu, Mengxue Ju, Lingao Wang, Gang Qian, Kaiyu Xiao, Yu Wang, Xinghuan Cancer Cell Int Primary Research BACKGROUND: High immunogenicity is an important feature of ccRCC, but its underlying immune-related molecular mechanisms remain unclear. This study aimed to investigate the effect of immune-related gene TEK on ccRCC and its prognostic value. METHODS: The immune-related differentially expressed genes (DEGs) and transcription factors (TFs) in ccRCC were screened based on The Cancer Genome Atlas (TCGA) database, and a regulatory network of TF was constructed. Prognostic-related immune genes were screened by univariate Cox regression analysis and functional annotation was performed. Univariate and multivariate Cox regression analyses were performed to construct the immune gene risk model and identify the hub gene TEK that independently affected the prognosis of ccRCC. The effectiveness of the TEK was verified by external microarray datasets. The relationship between TEK and immune cells in ccRCC was evaluated based on Tumor Immune Estimation Resource (TIMER). The expression of TEK in clinical specimens was verified by qRT-PCR and immunohistochemical (IHC) staining. MTT and cloning formation assay were used to evaluate cell proliferation. Transwell assays were used to assess cell migration. Apoptosis was assessed by flow cytometry, and the expression of related proteins was detected by Western blot and immunofluorescence. RESULTS: We constructed a prognostic model consisting of 12 hub genes and performed risk scores to determine the relationship between these scores and prognosis. Through Cox regression analysis and survival analysis, TEK, an immune marker highly related to survival prognosis, was obtained and validated. In vitro experiments showed that knockdown of TEK promoted the proliferation and migration of ccRCC cells, and we found that TEK promoted apoptosis by regulating the phosphorylation of AKT, thereby inhibiting cell proliferation. CONCLUSIONS: TEK plays an important role in risk assessment and survival prediction for ccRCC patients as a new immune gene and maybe an emerging target for immunotherapy for ccRCC patients. BioMed Central 2021-02-18 /pmc/articles/PMC7890987/ /pubmed/33602230 http://dx.doi.org/10.1186/s12935-021-01830-1 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Primary Research Chen, Siming Yu, Mengxue Ju, Lingao Wang, Gang Qian, Kaiyu Xiao, Yu Wang, Xinghuan The immune‐related biomarker TEK inhibits the development of clear cell renal cell carcinoma (ccRCC) by regulating AKT phosphorylation |
title | The immune‐related biomarker TEK inhibits the development of clear cell renal cell carcinoma (ccRCC) by regulating AKT phosphorylation |
title_full | The immune‐related biomarker TEK inhibits the development of clear cell renal cell carcinoma (ccRCC) by regulating AKT phosphorylation |
title_fullStr | The immune‐related biomarker TEK inhibits the development of clear cell renal cell carcinoma (ccRCC) by regulating AKT phosphorylation |
title_full_unstemmed | The immune‐related biomarker TEK inhibits the development of clear cell renal cell carcinoma (ccRCC) by regulating AKT phosphorylation |
title_short | The immune‐related biomarker TEK inhibits the development of clear cell renal cell carcinoma (ccRCC) by regulating AKT phosphorylation |
title_sort | immune‐related biomarker tek inhibits the development of clear cell renal cell carcinoma (ccrcc) by regulating akt phosphorylation |
topic | Primary Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7890987/ https://www.ncbi.nlm.nih.gov/pubmed/33602230 http://dx.doi.org/10.1186/s12935-021-01830-1 |
work_keys_str_mv | AT chensiming theimmunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT yumengxue theimmunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT julingao theimmunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT wanggang theimmunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT qiankaiyu theimmunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT xiaoyu theimmunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT wangxinghuan theimmunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT chensiming immunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT yumengxue immunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT julingao immunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT wanggang immunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT qiankaiyu immunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT xiaoyu immunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation AT wangxinghuan immunerelatedbiomarkertekinhibitsthedevelopmentofclearcellrenalcellcarcinomaccrccbyregulatingaktphosphorylation |